Chroococcidiopsis thermalis: Chro_4030
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Entry
Chro_4030 CDS
T02360
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cthe
Chroococcidiopsis thermalis
Pathway
cthe03410
Base excision repair
cthe03430
Mismatch repair
cthe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Chro_4030
03430 Mismatch repair
Chro_4030
03440 Homologous recombination
Chro_4030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthe03400
]
Chro_4030
DNA repair and recombination proteins [BR:
cthe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Chro_4030
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Chro_4030
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Chro_4030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AFY89434
UniProt:
K9U5A6
LinkDB
All DBs
Position
4547622..4549685
Genome browser
AA seq
687 aa
AA seq
DB search
MLAQPPSGLPRRPRRLPNQRWQIHPAQPELVSQLTTINQLSPIVNQLLVNRGIETPAQAE
IFINPETLDLPSPLEAFSDLAIAIDLLEQAIASQEKIAICGDYDADGMTSTALLLRSLRW
LGAQVDYAIPSRMQEGYGINKRIVEEFHSEGVRLILTVDNGIAAIEPIARARELGLNVIV
TDHHDIPPTLPPANAILNPKLIPESSPYWGLAGVGVAYVLAICLAQKTGQLKGLVKPLLE
LFTLGTIADLAPLIGVNRRWLKRGLRLLPQSQLEGIQALIQVSGVNDKNKSLKPDDIGFR
LGPRINAIGRIGDPQIVIDLLTTDDAGIALERAMQCEQINARRQQLCEEIEREAIAYVES
SHAMSLQEDRVLLVVQPNWHHGVIGIVASRLVERYGVPVFIGTYEDEHHIRGSARSIPEF
NVFDALEFCRDLLGKFGGHKAAGGFSLSAENLEALRSRLIQFANSCLQPEHLKPLLQIDT
QANLDRLNLQLYQQLDILHPCGIENPEPVFWTANVKVIDQQIIGKGHIKLTVVQEKDLSV
GAHSRAPLQQMKAIAWRWREYFPLPPRIDIAYRLRENTWNGNTNIELELIGVRLPNQPQI
LFSLRRTATTIPFEYKQRRYTCGVFPTNNSLELRIKNTEGRVLAIEAGNLMGLLGSSRKD
ATQVDLFQPHYYNLVQAAIQALEMAKT
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
gtgttagcccaaccgccatcaggattacctcgccgtccgcgtcgcttgccaaatcagcgc
tggcaaatacatccagctcaaccggagttggtcagccagttgaccacaataaaccagctc
tcacctatagtcaaccagcttttagtcaatcgcggcatcgagacaccagcgcaggcagaa
atatttatcaatccagaaactttagatttgccctcacccctagaggcattttccgaccta
gcgatcgccatagacttattagaacaagcgatcgcttcccaagagaaaattgccatttgc
ggcgactacgatgctgatgggatgacgagtacagccttgctactccgcagcctgcgctgg
ttgggggcgcaagtcgattatgccattcccagccggatgcaggagggctatggaattaac
aagcggattgtcgaagaattccacagtgaaggcgtgcggctgattttaaccgtagataat
ggtattgccgcgatcgaaccaatcgccagagcaagagaactcggtttaaatgtcatcgtc
accgaccatcacgacattccccccactttacccccagcaaacgcgatcctcaatcccaaa
ctcattcccgaatcttcaccttattggggtttagctggggttggtgttgcttacgtccta
gctatttgtctggctcagaaaacaggacaactcaagggtttagtcaagcctttattggaa
ctctttacactaggaacgatcgccgatctcgcacctttaatcggtgtcaatcgtcggtgg
ctgaaacgcggattgagactgctgcctcagtctcagcttgagggaattcaagccttgatt
caagttagtggtgtgaacgacaaaaataagtcactcaaaccagatgatatcggttttcgc
ctcggtccccgtattaatgcgatcgggcgaattggcgatccgcaaattgttatcgatcta
ttgacaactgatgatgccggaattgccttagaacgggcaatgcaatgcgaacaaattaac
gcccgtcgccaacaactttgcgaagaaatcgaacgggaagcgatcgcttatgtcgaatca
tcgcacgccatgtctctacaagaggatcgcgtcttacttgtcgttcaaccaaattggcat
cacggcgtaatcgggatcgtcgcctctcgcctggtagaacgctacggcgtacccgtattt
attggcacgtatgaagacgaacatcacattcgcggttcagcacgtagtattcctgaattt
aatgtttttgatgccttagaattctgtcgagatttattaggtaagtttggcggacataaa
gcagcaggtggtttttccctttcagccgaaaacttagaagcattgcgatcgcgtctgatt
caatttgctaactcttgtttgcaaccggaacacttaaagccactgctacaaattgacacg
caagccaatttagatcggctcaatttacaactttatcaacagttagatattttacatccc
tgtggaattgaaaatccagaacccgttttttggacggctaatgttaaagtcatcgaccag
cagattattggtaagggtcatattaaattaactgtagttcaagaaaaagatttatctgta
ggggcgcacagccgtgcgcccctacaacaaatgaaagcgatcgcctggcgttggcgcgaa
tatttccctttaccaccacggatagatattgcctatcgtttgcgagaaaatacttggaat
ggtaatactaatattgagttagaattaatcggcgtgcgcctacctaatcagccgcaaata
ttattttcactcagacgaactgccactacaattccctttgaatacaaacagcggcgttat
acttgcggtgttttccctacaaacaattcattagaattaaggattaagaacactgaagga
cgagttttagcaattgaggcaggaaatctgatggggttattaggtagtagccgtaaagat
gctactcaagtcgatctctttcaaccccattattacaatcttgttcaagctgcaattcaa
gctttggagatggctaaaacttaa
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