Chroococcidiopsis thermalis: Chro_5086
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Entry
Chro_5086 CDS
T02360
Name
(GenBank) RNAse Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cthe
Chroococcidiopsis thermalis
Brite
KEGG Orthology (KO) [BR:
cthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cthe03016
]
Chro_5086
Enzymes [BR:
cthe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Chro_5086
Transfer RNA biogenesis [BR:
cthe03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Chro_5086
Prokaryotic type
Chro_5086
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AFY90460
UniProt:
K9U6K8
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All DBs
Position
5710868..5711833
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AA seq
321 aa
AA seq
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MQITFLGTSSGVPTRSRNVSSVALRLPQRAEVWLFDCGEGTQHQIMRSDLKISQINRIFV
THMHGDHVFGLMGLLATCGLAGSPHRIDIYGPPKLEEYLRACGRYSQTHLSYPLHVHTVQ
PGMVYEDEEFTVSCDRLEHRVPAFGYRIAEKDRPGRFDVEQAKALNIPPGRVYGQLKRGE
TVTLNDGRVIRGVDLCGDTEAGRKLAYCTDTIFCDGAVALAQGADVLIHEATFSHIDAEL
AFQRLHSTSTMAAQTALAAQVKLLVMTHFSPRYAPGNDIQLQHLLEEARAIFPNTEMAHD
FLTYEIPRRRQPEGEKQAAKV
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtgcagattacttttttaggaacgagttctggtgtaccgacgcgatcgcgtaatgtttct
agtgttgcccttcgcctaccgcaacgagcagaagtctggctatttgactgcggggaagga
actcagcatcagattatgcggagtgacttaaaaattagccaaattaaccgcattttcgtc
actcacatgcacggcgatcatgtttttggcttaatgggattgctagctacttgtggtttg
gcgggtagtccgcaccgaattgatatttacggtccgccaaagttagaagagtatctccgc
gcctgcggtcgctattctcaaactcatctatcttacccgctgcacgtccatacagtacag
cctgggatggtttacgaggatgaagaatttacagtgagttgcgatcgcttagagcatcgc
gttcctgcttttggctaccgaattgccgaaaaagaccgtccggggaggttcgatgtcgaa
caagccaaggcgttaaacatccctcctgggagagtatacggtcaactgaagcggggtgaa
acggtaactctcaatgacgggcgggtgattcggggagtcgatctatgcggtgacacagaa
gcagggcgcaagctagcatactgtactgatacaattttctgcgatggggcagttgctctt
gcccaaggtgcggacgtactaatccacgaagcgacattttctcatatcgatgcagaactc
gcttttcaacgtttgcattccacatcaacaatggcagcacaaacggcattagctgcccaa
gtaaagctactggttatgacacattttagccctcgctacgcccctgggaatgacattcaa
ttacaacaccttctagaagaagcgcgggcgatctttcccaatactgaaatggcacacgac
tttttaacttatgaaattccccgtcgtcgtcaaccagaaggagaaaagcaagcggcaaag
gtctag
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