Chroococcidiopsis thermalis: Chro_5156
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Entry
Chro_5156 CDS
T02360
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cthe
Chroococcidiopsis thermalis
Pathway
cthe03420
Nucleotide excision repair
cthe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Chro_5156
03430 Mismatch repair
Chro_5156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthe03400
]
Chro_5156
Enzymes [BR:
cthe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Chro_5156
DNA repair and recombination proteins [BR:
cthe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Chro_5156
MMR (mismatch excision repair)
Other MMR factors
Chro_5156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AFY90528
UniProt:
K9U7E4
LinkDB
All DBs
Position
complement(5785038..5787482)
Genome browser
AA seq
814 aa
AA seq
DB search
MPEANLTDQLSIPTPDSSTGAQLCARTNNWEQLRNSLRPGQQQMADWQGGQLAVSAVPGA
GKSTGMAAATAIAIARYQLHAKRAIVVVTFTRSAAANIKGKIRRYLREELSLPPRGFTVN
TLHGLALNIASRYPDLSGLPLDNATLITPNQSHRLIRTCVEQWIAANPRLYSRLLEGRQF
DGEETERLRRQSVLRTEVLPGLAYLVIHEAKSSGYQPQQLRVLGEQAIDEYEILTVAAGL
YEQYQNLMRSRDLIDYDDMILAALRVLENPSARRNEQKQVFAVFEDEAQDSSPLQTKLLE
ILAQDPENPDLPPNLIRVGDPNQAINSTFTPADPIYFRRFCEECQQQQLLATMDMAGRST
RIVIAAANFMLGWVNGREQGVGSREQGGRGQGGQGGQGSGQPITNYQLPITSLPFRAQTI
HPVSLDDPQPDANPAPIGGGLELHTPRDIHHTAELIGRRVVALCQAGSNGETQTPETPNN
LRMAVLVRENRQGRWLAEAIAPICQEHNIVVYEVSESDRHSQVPAEVLALLQFLDRPHSP
DYLKAALEVLVQRQLIQPQDLNALATIPEQFLYPGPLDAPQPEPAQKASHLCRSLLRARM
ELPPYQLISFLALTLNYDQAELATADKLAERVQQQLAGNGSHNLAAMLLVLSEIVNSEKF
EAVDTEDSEARYTRPGQLTIITMHKAKGLDWDCVFIPFLHENTIPGNLRVLPQAHFLGDF
TVAEVARAQIRAALHEQFPLPDVATAWEQAKQLKTAEEFRLLYVAITRAKRLLWISAAQK
APFTWSKPENLDNSRPCPVFSALVRQFPRSLVTT
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagccaacctcaccgaccaattatccatcccgactcccgactctagtacgggc
gcacagctgtgcgcccgtacaaataattgggaacagctgcgcaacagcttgcgcccagga
cagcaacaaatggcagattggcaggggggacagttggcagtctcggcagtgccaggggca
ggcaaatcgacgggaatggcagcagcaacggcaattgcgatcgcccgctatcaattacat
gccaaacgtgcgattgttgttgttacatttactcgttctgcggcagcaaatattaaaggt
aagattcgcaggtatttacgagaagaattatctctaccaccaagaggattcactgtcaat
accctacacggtttagcgctgaatattgccagccgctatcctgacttgtcgggactaccg
ttggataacgcgacgttaatcacgcccaaccagagccaccgcttgattcggacttgtgta
gaacagtggattgctgctaatccccgcttgtattctcggttactcgaaggtaggcaattt
gacggcgaagaaacagaacgcttacggcgacagtcggtattgcggacagaagtactacca
ggattagcttatttagtcattcacgaagcgaaaagctctggatatcaaccgcaacagttg
cgagtgttgggcgaacaggcaatagatgaatatgaaattttaaccgtcgccgctggattg
tacgaacagtatcagaatctaatgcgatcgcgcgatttaatcgactacgacgatatgatt
ttggcagcgctacgggtactagaaaatcctagcgccagacgcaacgaacaaaagcaagtt
tttgccgtatttgaagacgaagctcaagactcttcacccctgcaaaccaaactcttagaa
attctggcgcaagatccagaaaacccagatttaccaccaaatttaatccgcgttggcgat
cccaaccaagcaattaattctacctttacccctgccgacccaatttattttcgtcgcttc
tgcgaagagtgccagcagcaacaacttttggcgacaatggatatggcaggacgcagcacc
agaattgtcattgccgcagctaactttatgttggggtgggtgaatggaagggagcaggga
gtagggagtagggagcagggaggaaggggacaagggggacaagggggacaagggagcggt
caaccaattaccaattaccaattaccaattacctctttgccatttcgagcgcaaacgatt
catccggttagcctggacgacccgcagccggatgctaatcctgcgccgattggtggggga
ttggagttgcatacgcctcgcgatattcatcacacggcagaattgattggtcggcgggta
gtggcgctgtgtcaagcaggatcgaatggagaaacacaaactccagaaacaccgaataat
ctgcgcatggcggttttagtgagggaaaacagacagggacgatggctggctgaagcgatc
gcgccgatttgccaagagcataatatcgtagtgtacgaggtttcagaaagcgatcgccat
tctcaagttccggcggaagtgctagcactgctgcaattcctcgaccgtcctcactccccc
gattatctcaaagctgccttggaagttttggtacagcgtcagttaatccaaccgcaagat
ttgaacgcgctggcaaccattcccgaacaatttctgtatcctggtcctttagacgcacct
caacccgaaccagctcaaaaagccagtcatttgtgccgcagcctgcttcgcgctcgcatg
gagttacctccctatcaattaatttccttccttgccttaaccctgaattacgaccaagca
gaactcgcgacagcagataagctagcagaacgagtgcagcaacaacttgctggtaatggc
agtcataatttggctgccatgttgctagtgttgagcgaaattgtcaattcggaaaaattt
gaagccgtggatacggaagattccgaggcgcgttatacccgtcctgggcaactgacaatt
attaccatgcacaaagctaaaggattggattgggactgcgtattcattccgtttttacac
gaaaatacaattcctggaaatctgcgcgttttacctcaagctcattttttgggagatttc
accgttgcagaagttgcccgcgcccaaattcgcgctgctttgcacgaacaatttccctta
cccgatgttgctacggcgtgggaacaggcaaaacaactcaagacagcagaagagtttcgc
ttactttatgttgccatcactcgcgccaaacggttactgtggatttctgcggcacaaaaa
gcacctttcacctggagcaaacctgaaaatttagataacagtcgcccctgtccggtattt
tcggctttagtgcgccaatttccgcgatcgctagtcacaacataa
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