Chroococcidiopsis thermalis: Chro_5488
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Entry
Chro_5488 CDS
T02360
Name
(GenBank) G/U mismatch-specific uracil-DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
cthe
Chroococcidiopsis thermalis
Pathway
cthe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Chro_5488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthe03400
]
Chro_5488
Enzymes [BR:
cthe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
Chro_5488
DNA repair and recombination proteins [BR:
cthe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Chro_5488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFY90848
UniProt:
K9U8A8
LinkDB
All DBs
Position
complement(6172206..6172757)
Genome browser
AA seq
183 aa
AA seq
DB search
MVQRKPTTAEIQAAYGRTVPDIIAPNLNVLFCGINPSLYSAAVGHHFARPGNRFWRSLHA
AGYTERILSPFEDRDLLQFGYGLTNIVDRATARADELKAEELIFGQQQLAVKIEQYQPRF
LAILGISAYRTAFYQPKAIMGRQAELSSGTTIWVLPNPSGLNAHYQIADLTRVYRELLLA
VKD
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaacgcaaacctaccacggcagaaattcaagcggcatacgggcgcacggttcca
gatattattgctccaaatttaaatgttttgttttgcgggattaatcctagtctctatagt
gctgctgtcggacatcactttgcccgcccaggaaatcgcttttggcgatcgcttcacgct
gcgggttacacagaacggatactgtcaccgtttgaagaccgggatctgttacagtttggt
tatggtttgacaaatatcgtcgatcgcgccacggctagggcagatgagttaaaagctgaa
gaattgatcttcggtcaacaacagttagcagtcaagatcgaacaatatcaaccgcgattt
ttagctattttgggtatcagtgcctatcggacagcattttatcagcccaaagctatcatg
ggaagacaagctgagttatcgtccggcacaacgatttgggtattacctaaccccagtggg
ttaaacgctcattatcaaatagcagatcttacgcgggtgtatcgagaattgctgctggcg
gtgaaggattga
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