Caldimicrobium thiodismutans: THC_0031
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Entry
THC_0031 CDS
T04224
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cthi
Caldimicrobium thiodismutans
Brite
KEGG Orthology (KO) [BR:
cthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cthi03016
]
THC_0031
Enzymes [BR:
cthi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
THC_0031
Transfer RNA biogenesis [BR:
cthi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THC_0031
Prokaryotic type
THC_0031
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
YidD
Motif
Other DBs
NCBI-ProteinID:
BAU22438
UniProt:
A0A0U4MZS7
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All DBs
Position
complement(30470..31423)
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AA seq
317 aa
AA seq
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MKEKGISGILVLDKPTGETSTSALEKIKKLLKVKKAGHGGTLDPIATGVLPIFLNEATKV
AQIFLEGDKAYEGEFQLGLTSDTYDITGEVLARYEVKDITLERIQGVVKDFLGEFEQIPP
PYSAAKFRGRPLYKYARDGLLIPKAPKKIKVYQFEIKNFKEGRCTFYLKCSKGTYVRSLV
HQLGEKLGCGAVLASLRRTQKSIFTLEQAHTLEEIQNIVKNNPEKIKEILIPLSKALEFL
PKVTISEDFSQRVREGHLINRTAFLSLIKFQKLSLSLTEKWIRLLDPKGRLVAIIENPLH
QKEKPYISYLRVFKNGI
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagaaaagggcataagtggaattcttgtcttggataagccaacaggggaaacctca
acttctgctttagaaaagattaaaaaacttctcaaggttaaaaaagctggacatggagga
acccttgatcctattgcaacaggggttttacctatttttttgaatgaagctaccaaagtt
gcccagatctttcttgaaggtgataaggcttatgaaggagagttccagcttggccttact
tcagatacttacgatataaccggagaggttctggcaagatatgaggttaaggatataact
cttgaaagaatccaaggagtagttaaagattttttgggtgaatttgagcagattcctcct
ccctattcagctgccaaattcagaggaagacctctttataaatatgcaagagatggcctc
ttaattccaaaggcacctaaaaaaataaaggtctatcagtttgaaattaaaaactttaaa
gagggaagatgcaccttttatcttaaatgctctaagggaacttatgtgcgaagcttagtg
caccagttgggtgaaaaattaggctgtggagcggtccttgcctctcttagaagaactcaa
aagagtatctttacccttgagcaggcccacacccttgaagaaattcagaatatagtaaaa
aataatccagaaaaaataaaggaaattctgatccccctctccaaagcccttgagttcctt
cctaaggtcacaattagtgaagatttttcgcaaagagtaagggaagggcatttaattaat
cgaaccgcctttttatccttgatcaaatttcaaaaattaagtttatcccttacagaaaag
tggattcgccttctggatcctaaaggaagattagttgccataattgaaaatccccttcac
cagaaagaaaagccttacataagttatctaagagttttcaaaaatggaatttaa
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