Caldimicrobium thiodismutans: THC_0184
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Entry
THC_0184 CDS
T04224
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
cthi
Caldimicrobium thiodismutans
Pathway
cthi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cthi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
THC_0184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthi03021
]
THC_0184
03400 DNA repair and recombination proteins [BR:
cthi03400
]
THC_0184
Enzymes [BR:
cthi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
THC_0184
Transcription machinery [BR:
cthi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
THC_0184
DNA repair and recombination proteins [BR:
cthi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
THC_0184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
BAU22584
UniProt:
A0A0U5ATK4
LinkDB
All DBs
Position
complement(190169..190435)
Genome browser
AA seq
88 aa
AA seq
DB search
MARVTVEDCLKAVPSRFRLIRLTIERVKQLREGAEPLINADNKEIVLALREIAQGAVTPE
NIKDLVKREKPSTPYEISEILKQKSLNP
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggccagagtaactgttgaagactgtttaaaagcagtgcccagcagatttaggctgatt
cgcttaactattgagcgagttaaacaactaagggaaggggctgagcctttaatcaatgcg
gataacaaggagattgttttagctttaagagaaattgcccaaggagcagtaaccccagaa
aacataaaagatctggttaaaagagaaaaaccttctactccttacgagatctccgagatt
ctgaaacagaaaagcctaaatccttaa
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