Caldimicrobium thiodismutans: THC_0389
Help
Entry
THC_0389 CDS
T04224
Name
(GenBank) RNA polymerase sigma70
KO
K03089
RNA polymerase sigma-32 factor
Organism
cthi
Caldimicrobium thiodismutans
Brite
KEGG Orthology (KO) [BR:
cthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthi03021
]
THC_0389
Transcription machinery [BR:
cthi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
THC_0389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
TrmB
HTH_3
HTH_5
HTH_25
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
BAU22785
UniProt:
A0A0U5APM1
LinkDB
All DBs
Position
387990..388955
Genome browser
AA seq
321 aa
AA seq
DB search
MSDERVEEGILEKLEELSSIALIDAVEEETKLPAKFDPLQRYLQEISRYPVLSRDEEEAV
AKAYYETKDPRLAYKLVVSNLRLVAKIALEFQKFWAYNFLDLIQEGNLGLLQAVKKFDPY
KGVKFSYYASFWIKAYILKYIMDNWKLVKMGTTQAQRKLFYKLRKEKERLSALGFEPTAK
EIAKSLGVKEKEVEEMEMRMYSQDLSLEAPVSYDSEETFGDFLKDARPGPEDTYAREEIL
NNFRRLLKDFAQELTGKDYIIFYDRLLAEEPKTLNELSQKLGISKERVRQIEEKIIKRLR
KFLQERLPDATLYPQALPYKE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgaaagagttgaggaaggcatcttagaaaaacttgaagagctaagctcaatt
gctcttattgatgcagttgaggaggaaaccaagctcccagctaaatttgatcctctgcag
agatatcttcaggagatctcaaggtatcctgtattatcaagagacgaggaggaggcagta
gctaaggcctattatgagaccaaagatccaaggctggcttataaacttgtggtttccaat
ttaagattggtagctaaaattgcccttgagtttcagaaattctgggcttataattttctt
gaccttattcaggagggtaatctcggtctccttcaggctgtgaaaaaatttgatccctac
aaaggggtgaaattttcttattatgcttccttctggattaaggcttacatactgaaatat
ataatggataattggaaactggtaaaaatggggactactcaggcccagaggaaacttttt
tacaaacttcgcaaagaaaaagaaaggctttcagctcttggttttgaaccaactgctaaa
gagattgccaaaagccttggagtcaaggaaaaggaagtagaagagatggaaatgcgcatg
tattcgcaggatctgagtcttgaggccccagtaagctatgattctgaagagacctttgga
gactttcttaaagatgcccgaccaggtccagaagatacctacgcccgcgaggagatattg
aataatttcagaaggcttcttaaagactttgctcaagaattaactggaaaggattacatt
atcttttatgaccgacttttagctgaagaacctaaaaccttaaatgaactttcccagaag
cttggtatctccaaggaaagagtaagacagattgaagaaaagattataaagagattaaga
aaatttttacaggagagattgccggatgcgaccctctatcctcaagccctaccttataaa
gaataa
DBGET
integrated database retrieval system
