Caldimicrobium thiodismutans: THC_0411
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Entry
THC_0411 CDS
T04224
Name
(GenBank) hypothetical protein
KO
K19224
peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
Organism
cthi
Caldimicrobium thiodismutans
Brite
KEGG Orthology (KO) [BR:
cthi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cthi01002
]
THC_0411
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cthi01011
]
THC_0411
Peptidases and inhibitors [BR:
cthi01002
]
Cysteine peptidases
Family C40
THC_0411
Peptidoglycan biosynthesis and degradation proteins [BR:
cthi01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
THC_0411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
NLPC_P60
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
LRAT
NMB0315_dom_I
SH3_CYT4
DUF6433
HRDC
DUF3071
Motif
Other DBs
NCBI-ProteinID:
BAU22807
UniProt:
A0A0U5AFM4
LinkDB
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Position
complement(412434..413735)
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AA seq
433 aa
AA seq
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MKQKLIIPGKNLSPSPVEEGHPLVHEKTAIPSEPPKEESYITHQIAKGENLYRISKKYAV
PLDEILRINQVSPQQLKPGMTLKIPKSKPSYEVQNLKPEKTKQALPQEPQKIYYIVKKGD
TLQKIAKKNGITLEELKRLNHLSAKRVKPGQKLLVKILPPVRPEERELPAAGEDKYHIVK
PGETLYSIALLYQVPLEKLMEANHLENNIIVVGQKLRIPPKLEIAEKPFVLQSPKESLES
KEESLSQKFEKNILDKKNKILTPAMLSKEGEKALQQKFIELSANLADARYKLGGTGNGYL
DCSAFVKLVYEELGINLPRSSLQQYQVGVPVERSELIPGDLVFFKTNGKRISHVGIYIGD
NRFIHISSSRKRVSIDVLDDPYFQKRYAGAKRVLNGEVLEYFQDYLNKAQKDNSSKKSLT
NPSSENTTSEAIL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacaaaaacttattattcctgggaaaaatctatctccttctccagtagaagaaggg
catcctttagtccatgaaaaaactgctatcccttcagaacctcctaaggaggaatcttat
attacccatcagatagctaagggtgagaatctttatagaatatccaagaaatatgctgtt
cctcttgatgaaatcctgcggattaaccaggtttctccacagcaattaaaacctggtatg
accttgaaaattccaaaaagtaaaccctcctatgaggtccaaaatttaaaaccagaaaag
accaagcaagctttacctcaagaaccccaaaaaatttattatatcgtcaaaaagggggat
acccttcaaaaaatcgctaaaaagaatggtatcacccttgaggaattaaagagacttaat
caccttagcgccaaaagggttaaacctggtcaaaaacttctggttaagatccttcctcct
gtaagaccagaagaaagagagcttcctgctgccggtgaagacaaatatcacattgttaaa
cccggggaaactctttatagcattgctttgctttaccaggttccccttgagaaactgatg
gaggccaatcaccttgaaaataatattatagttgttggtcaaaaactgcgcatcccaccc
aaattagagattgctgaaaaaccctttgtcttgcagagtccaaaggagtccttagaatca
aaagaagagagcctatcccagaaatttgaaaaaaatatacttgacaagaaaaataaaatt
cttaccccagccatgctttccaaggaaggggaaaaggccttacaacaaaagtttattgaa
ctctccgccaatcttgccgatgcccgttataaattaggagggacaggcaatggatatttg
gactgttctgcctttgtaaaacttgtttacgaagagttagggataaatcttcctcggagt
tccttacagcaatatcaagttggagttcctgtagaaagatcggagctaattccaggagat
cttgttttcttcaagaccaatggcaaaagaatctcccatgtgggtatctacattggggac
aatcgttttattcacatctcatcttctcgcaaaagggtctccattgatgttctggatgat
ccatactttcaaaagagatatgcaggagccaaaagagtgttaaatggtgaggtgctggaa
tattttcaggattatctgaataaggctcaaaaagataattcctcaaaaaaatctttaacc
aatccctcctctgaaaatactacctcagaagcaattctttag
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