Caldimicrobium thiodismutans: THC_0770
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Entry
THC_0770 CDS
T04224
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cthi
Caldimicrobium thiodismutans
Brite
KEGG Orthology (KO) [BR:
cthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthi03400
]
THC_0770
Enzymes [BR:
cthi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
THC_0770
DNA repair and recombination proteins [BR:
cthi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
THC_0770
Prokaryotic type
THC_0770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAU23161
UniProt:
A0A0U5AZJ5
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Position
complement(773334..774710)
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AA seq
458 aa
AA seq
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MENKRYIYLNKGVALHGDYVLYVPLASHRVSYNFTLKKAIEEATSFKKPLLILYPLYKNF
VTSTQSHIIFLFEGLLDFERDLKRYNLELIVKVGDPFSVVSAASKRAVLIVTDFPYLKGE
RFFIERIAKITQKPMILVEGNVLVPVTFISQKEELYARNLRPKILKNWINFFEDFTLPEA
PFGSYEMDEECLNIEELLKKEHKLLELCRDLEVDLRVPPVREHFQGGYSEAIKKLEVFVR
EKLPYYRELRSEPGYECESNLSPYLRYGQISPIEILKKIFEVRLMTDDNVKSFFNELVVW
RELARNFCLYNDNYDSFSGLPEWARKTLISHMKDPREKKYTLTELEKAEVDNIYWRASQI
ELLRKGKIHNYMRMYWCKRLLFWTDTPENAFKIALYLNNKYALDGEDPNTYLGVAWCFGA
FDHPFTEREILGKVRPFSEFALKRKKSLSLYLKKWLSS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataagagatatatttacttgaataaaggagtagctttacatggtgattatgtt
ctatatgttcctttagcaagtcatagagttagttacaattttactttaaaaaaggcaatt
gaagaggcaacaagttttaaaaaacctctcttaatcctatatcccctctataaaaatttt
gttacttcaactcagtcacacattatttttctttttgaaggactcttagattttgaaaga
gatctgaaaagatataatctggaactgatagtaaaagtaggagatcctttttcagtggtt
tctgcggcttcaaagcgagcagttttgattgttacagattttccttatcttaaaggagaa
aggttttttattgaaagaatagccaaaataactcaaaaacctatgattcttgttgagggc
aatgttcttgttccagtgacttttatctcccaaaaagaagagctttatgccagaaattta
aggccaaaaattctcaaaaactggataaatttttttgaggattttacccttcctgaggct
ccttttggttcctatgaaatggatgaagaatgtcttaatatagaagagcttttgaaaaaa
gagcataaattattggaattatgtagagatctggaagtagatttaagggttccaccagtc
agagagcattttcaaggtggttattctgaggctataaaaaagcttgaggtatttgtgagg
gaaaaactaccctattacagagaattaagaagtgaacctgggtatgagtgtgaaagtaat
cttagtccctatttgagatacgggcaaataagccccattgaaattttaaaaaaaattttt
gaagtcaggttaatgactgatgataatgttaaaagtttctttaatgagcttgttgtgtgg
agagaacttgcgagaaatttttgcctttacaatgataattatgattctttttctggtctt
ccagaatgggcaagaaaaacccttattagtcatatgaaagatccaagagagaaaaaatat
actctaacggaattagaaaaagctgaagttgataatatatactggagggcctctcaaatt
gaacttttaagaaagggaaagatccacaattatatgcgaatgtattggtgtaaaaggctt
cttttttggacagatacacctgaaaatgcctttaagattgcattatatcttaacaataaa
tatgccctggatggagaggatcctaatacctatcttggagttgcatggtgttttggagca
tttgatcatcccttcacggaaagagagattctgggaaaagtaaggcctttttcagaattt
gctttaaagagaaaaaaatctctctccctttatcttaaaaaatggctatcctcctaa
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