Caldimicrobium thiodismutans: THC_0961
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Entry
THC_0961 CDS
T04224
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
cthi
Caldimicrobium thiodismutans
Pathway
cthi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cthi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
THC_0961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthi03400
]
THC_0961
DNA repair and recombination proteins [BR:
cthi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
THC_0961
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
AAA_27
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
BAU23345
UniProt:
A0A0U5AR21
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Position
complement(965859..968414)
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AA seq
851 aa
AA seq
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MRGLPKTEITPMFRQYFEIKGKHPDCILFFRLGDFYEMFFEDAETVSPILGLVLTKREAG
KDLTAPMCGIPADKSETYIQRLLELGFKVAICEQVEDPALAKGLVKREVVRVYTPGLFVD
FQFLKEKEKTYLASLGLGTKKAGLAFLELSCEEFLYTELPIEKLLTEILKREPREILLDT
ALKETDLVKRVNQSLPQVHLTFLEKEAFRIYQKAYEGISESEEVKAALSGILYYLKLYQP
SLAERLGPPLFYFPEEFLYLDENTKRNLELLKNLWDGTEKYSLYWVLDRTKTPMGARLLK
EWILYPLREITIIKKRQRGIEFFLENRGLRENLVQGLKSLADLERLGSRLSLRVINPREL
AFLRDGLKVLPELKNGLKHALNFIDCPEILREIYEDLSDIEDILGELEGSLVENPPLALK
EGGIFKKGYRAEIDELKNLRENSLLFLSQLEAELKAKTGIPTLKIGYNRVFGYYVEVSKG
YLRSVPSYFERKQTLVNAERFMVPELKALEEKILSAEERLKNLEYEFFLELREKMAKKAE
EIKTSAKALALLDVLIALAEVAEKYKYICPEITEERVLDIEEGRHPVLERLQGEENFIPN
SLELKEGDTEVLIITGPNMGGKSTFLRQTAQIVLLAQMGSFVPAKRARVGLFDKIFTRIG
AGDELIRGKSTFMVEMSECAQILNNATDRSLVLLDEVGRGTSTFDGMSLAWAITEYLYKK
RVFTLLATHYFELTELAKVYPGIKNFHAEVREWQDQVIFLYRILPGSADQSYGIEVARLA
GLPEMVLQRAKEILKEAEGKRPRFKQKQLSLFSGDAKSGLFDKIKSIDPDKLSPKEALEF
LYQLKKELDGF
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgagaggacttcctaaaaccgagattacccctatgtttcgtcaatattttgaaataaag
ggcaaacaccctgattgcattctcttctttcgcttaggggatttttatgagatgtttttt
gaggatgctgaaacagtatcccctattcttggacttgttttaaccaaaagagaggctggt
aaagacttaactgctccaatgtgtgggattccggcagataagagtgagacctacattcaa
agactcttagagcttggctttaaagtagctatctgtgaacaggtggaagatccagcctta
gccaaaggtttagtgaaaagagaggttgttagggtttacactccaggtctttttgttgat
tttcagtttcttaaggaaaaagaaaagacctatcttgcttccttaggccttgggacgaaa
aaggcaggccttgcctttcttgaactctcctgtgaagagtttctctatactgagcttcct
attgaaaagctcttaacggagattctcaaaagagagcccagggagatacttcttgataca
gccttaaaagagaccgatcttgttaaaagggttaaccaaagtttgcctcaggttcatctt
acttttcttgaaaaagaggcctttagaatttatcagaaggcctatgaggggatctctgaa
tctgaagaggttaaagcagctctctcagggattctctattatcttaagctttatcaaccc
tccttagcagaaaggcttggccccccacttttttattttccagaagaattcctctattta
gatgaaaataccaagagaaatcttgagcttttaaaaaacctctgggatggcactgaaaaa
tatagcctctactgggtccttgatagaactaaaacccctatgggagctcgtctcttaaag
gagtggatactttatcctttaagagaaattactatcattaaaaaaagacagaggggaatt
gagtttttccttgaaaatagggggctaagggaaaatcttgtccagggccttaaatcttta
gctgatcttgaaaggctgggaagcaggctaagcctcagggttataaatccacgggaactt
gctttcttaagagatggcctgaaggtgctccctgagcttaaaaatgggctaaagcatgcc
ctaaattttattgattgtccagaaattttaagggagatttacgaagacctttcagatata
gaggatatccttggtgaacttgaagggagtctggtggaaaatccccccttagccttgaaa
gagggaggaatttttaagaaagggtatagagcagagattgatgagcttaaaaatctgcga
gaaaacagtcttctttttctctctcagcttgaggcagaacttaaggctaaaacagggatt
ccaacccttaagatcggatataacagggtttttggttattatgtagaggtctccaagggt
tatctacgaagtgtgccctcttattttgagagaaaacagactcttgtcaatgccgaaaga
tttatggtcccggaactaaaggccttagaggaaaaaatcctttcagctgaagagaggttg
aaaaacttagagtatgaattttttcttgagcttagagaaaaaatggccaagaaggctgaa
gagattaagacctcagccaaggccttagccctccttgatgtgttaatagccctggcagaa
gttgctgaaaagtataaatacatctgtcctgagattaccgaggagagggttttagatatt
gaggaagggagacacccggttttagagagattacagggagaggaaaattttattcctaac
tcccttgaattaaaagagggagatacggaggttctaataatcacagggccgaatatgggt
ggaaaatctacctttttaaggcaaactgcccagattgtgcttcttgcacagatgggtagt
tttgttccagctaaaagggcaagagttggcctttttgataagatctttacaagaattggg
gcaggggatgagctcattcgggggaaaagcacctttatggttgagatgagcgagtgtgct
caaattcttaataatgctacagatagatcattagtcttgttagatgaagtggggcgagga
acaagcacctttgatggaatgtcccttgcctgggccataacagagtatctttataagaaa
agggtttttactctccttgctacccattattttgaattaaccgagcttgccaaggtctat
ccagggatcaaaaactttcatgctgaggtgagggaatggcaggatcaggtaattttttta
taccgcattttaccggggtcagctgatcaatcctatggaattgaggttgcaagattggcc
ggtcttccggaaatggtcttgcagagggctaaagagatcctgaaagaggctgaagggaaa
agaccaaggtttaaacaaaaacaactttccctcttttcaggggatgcaaaatcaggactt
tttgataaaattaaaagcattgatcccgacaagctcagcccaaaggaggccttagaattt
ctttatcaattaaaaaaagaattagatggtttttga
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