Caldimicrobium thiodismutans: THC_1024
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Entry
THC_1024 CDS
T04224
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cthi
Caldimicrobium thiodismutans
Brite
KEGG Orthology (KO) [BR:
cthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthi03400
]
THC_1024
DNA repair and recombination proteins [BR:
cthi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
THC_1024
Archaeal homologous recombinant proteins
THC_1024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_16
GTP_EFTU
Fusion_gly
Motif
Other DBs
NCBI-ProteinID:
BAU23408
UniProt:
A0A0U5B5P9
LinkDB
All DBs
Position
complement(1038467..1041433)
Genome browser
AA seq
988 aa
AA seq
DB search
MRPLYLSIQGFGPYLKTVLDENIFYLIHKERLFLISGEIGSGKTTLFDAILFAIFGEASF
PERTPKDLISHLLKRYPQIVPEVTFNFLYQGKIYRVLRRPPYERQTGTVSLWIGNKLYSQ
KAGEVSEKIRELFGLDGKQFKKVFLIPQGEYREILLSDPKERKALFEKLFDTETLSRLEE
FFKEQAKALKEKLTLLKEREAELMKLAEVSRPEELVEKLKYLSNQNELIQRELKKLTQGL
KHCEEDIKKKEQALELLQKGLSLEKELKELSTKLPEIEALKEKVEKLKSLRGKAPYLEAL
ERNKILIKERHLALQKEKTSIEKLNIALKENSQRLNELSEREAHIKIKREELLKKEEALQ
TLQKARLYEENLRELERIYLNTKNELESVESSGEVLQKKLELIQKEREELKNLLEISRAL
AEKKEKLSYLRAFYEKNQNLLKLKEKLKELERQRHYLQKELEHLKMKHLAIILSQNLREG
EPCPVCGSLVHPAKPQRDLFLPQIEHLQKNLEKVEAEIENTKKEASHLEGELSFLQNMVQ
EKEEEIKESLLALEKSYGELVQKKFSFKELTQYEKKEKELKLLLEGLERQKKELQNRLLQ
VSEKRASLEGEIKALKGFLKDSQDEEKLKEEIKRITEEIKLFEENSKKLQATHLKLERVL
HTHMANYENLKREIKERLQELKAFAKELVSLIKGRLFKNFSEIKKGLQEIKNLPHYEKYL
FDFERDRHRLTLALRELKEEASKNNLTLNPETLKQLTIELTKLNQEKLKIEKEKVERERN
LGKVEELLHQSENYLKSYGEILKEKRVLEEEYPYLEKLSLLLSGKNTNISFHSFVLSRFL
SLILKKANTYFSDFTFGRYRFVEGDIFTKRFILEVFDTYTGSKREVKTLSGGESFLAALS
FALGSSDVLLTLSKKGPLETLLIDEGFGSLDEQTLDRVVQSLLNLSQRTGKIIGVISHLK
ELKERFPLVLEVIKNPEGGSSIKMRRNL
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgcgccctctttatctctcaattcagggctttggcccctatttaaaaacagtccttgac
gaaaatatcttttatctgatccacaaagagagactttttcttatctcaggggagataggc
tctggaaagaccaccctctttgatgccatcctttttgctatctttggagaggcttccttt
cctgagcgcacacctaaggatcttatctcccatctgcttaaaagataccctcaaattgtc
ccagaggtaactttcaattttctctatcagggaaagatttacagggttttgcgcagaccc
ccttatgagagacaaacaggcacagtttccctctggattggaaataaactatattctcaa
aaggcaggtgaggtctcagaaaagattcgtgagctctttggcctggatggaaaacaattc
aagaaggtctttttaatccctcagggagaataccgagagatactcctttctgatcctaaa
gaaagaaaggccctctttgaaaaactctttgatacagagaccctatcaagacttgaggaa
ttttttaaagaacaggctaaggccttaaaagaaaagctcactcttcttaaggagagagag
gctgagcttatgaaacttgccgaggtgtccagacctgaagaacttgttgaaaagcttaaa
tacctctcaaatcagaatgagcttattcaaagggaattaaaaaaacttacccagggatta
aaacattgcgaggaagacattaaaaaaaaggagcaagcccttgagcttcttcaaaaagga
ctctctcttgagaaagaattaaaggaactatccacaaaacttcctgagatagaggcctta
aaggaaaaggttgaaaaattaaaatccctacgagggaaagctccatatttggaggcctta
gagcgaaataaaatccttatcaaagaaagacatcttgccttgcagaaggaaaagacctct
attgaaaaactcaatatcgccttaaaagagaactctcaaaggttaaacgaactttctgaa
agggaagctcacattaaaatcaaaagagaggagcttttgaaaaaggaagaggccttgcaa
accttacaaaaggcaaggctttatgaggagaatcttagagaacttgaaagaatatacctg
aatacgaaaaatgaattggaatctgtagaatcctcaggagaagttttacaaaagaagctt
gaattaatccaaaaggagagggaggagctaaaaaatttacttgaaatctcaagagctctg
gcggaaaaaaaagaaaagctatcttatttaagggccttttatgaaaaaaatcaaaacctt
ctaaagcttaaagaaaaactcaaagaacttgaaaggcagaggcactacctgcagaaagag
cttgagcacttaaaaatgaagcaccttgccataattctatctcaaaacctgagagaagga
gagccctgtccggtctgtggatcccttgtccatcctgctaaaccccaaagggacctcttt
ttgcctcagattgagcaccttcagaaaaatttagaaaaagttgaggcagaaattgaaaat
actaaaaaagaggcctctcaccttgaaggagagctttctttcctccaaaatatggttcaa
gaaaaggaagaagaaataaaggaaagtcttttggctctggaaaaatcttatggggaactt
gttcagaaaaagttttcttttaaagaacttactcagtatgaaaaaaaagaaaaagagctt
aaacttctgcttgaaggtttggaaagacaaaaaaaagagcttcaaaatagacttctccag
gtctcggaaaaaagggcatccctggaaggagagattaaggccttaaagggctttttaaag
gattctcaagatgaagaaaaacttaaagaggagattaaaagaattactgaagaaatcaaa
ctctttgaagagaactctaaaaaacttcaggcaacccatttaaaacttgaaagggtcctt
cacacccatatggccaattatgaaaaccttaagagagagattaaagagcgtctgcaagaa
ctaaaggcttttgctaaggaattagtctccttgataaaagggagactttttaaaaatttt
tctgaaataaaaaagggccttcaggaaattaaaaatcttccccactatgagaaatatctt
tttgattttgaaagggatagacacagactcaccttggccctcagggagctaaaagaagag
gcctctaaaaataatctaactttaaatccagaaaccttaaagcaacttactatagaacta
accaaattgaatcaggaaaagcttaaaatagaaaaagaaaaggtggaaagggagagaaat
cttggaaaggtggaggagcttcttcatcagtctgaaaattatctaaagtcttatggagag
atattaaaggaaaaaagggttctggaagaggagtatccctatcttgaaaaactaagcctt
cttctttccggaaaaaataccaacatttcctttcactcctttgttctctcgcggttttta
agtcttattctcaaaaaggctaacacctatttttctgattttacctttggaagatatcgc
tttgttgagggagatatctttactaaaaggtttattcttgaggtctttgacacctatact
ggttcaaagcgtgaggtaaagactctctcagggggagaatcctttttagcagctctttcc
tttgcccttggttcatctgatgttctgctaaccctttccaaaaaaggacctcttgagacc
ctactcattgatgaaggctttggttccttagatgaacaaaccttagacagggtcgttcag
agtttacttaatctctcccagagaacaggaaaaatcataggggttatctcccatttaaag
gaactcaaggagcgttttccccttgtccttgaggtaatcaaaaatccagagggcggaagc
tccattaaaatgaggagaaatctttga
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