Caldimicrobium thiodismutans: THC_1211
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Entry
THC_1211 CDS
T04224
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cthi
Caldimicrobium thiodismutans
Brite
KEGG Orthology (KO) [BR:
cthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthi03400
]
THC_1211
DNA repair and recombination proteins [BR:
cthi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
THC_1211
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Rubredoxin_2
ChlI
DnaB_C
AAA_22
Lon_C
AAA
nSTAND3
AAA_24
AAA_16
TniB
AAA_14
NTPase_1
ABC_tran
CbiA
ATPase_2
AAA_30
KTI12
AAA_19
Rad51
NACHT
SLFN-g3_helicase
MeaB
AAA_5
Fer4_NifH
ArsA_ATPase
SRP54
PAXNEB
IstB_IS21
KdpD
T2SSE
RNA_helicase
DAP3
Zeta_toxin
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BAU23582
UniProt:
A0A0U5AY39
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Position
complement(1216581..1217897)
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AA seq
438 aa
AA seq
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MSYQCQSCGYKSLKWLGRCPECGAWNSFLEEKEERASKKRETKPFRVLKLAEVSYFSKPR
ISTGLSEFDLVLGGGIVPASLILIGGDPGIGKSTLLTQMAGYLTEQGKRVLYFSAEESPE
QVKLRTKRLQIVEDFYFLSETDLSLLFEVVEEIKPEVIIVDSIQTVYLPELASSPGSVSQ
VRECANQLLRLAKEKDISIFLVGHITKEGVIAGPKILEHLVDVVLYLEGERETGFRILRA
MKNRFGAVNEIGVFVMTEAGLKSHSQYEELFLTGKGAPFCILEGTRPLIVEVQALTSKSY
LSLPRRQSVGYDPIRLSLLCAILEKRLGLSLGDKDVYVKVAGGLRITDPSADLAISVSLL
SSLFEKELPQKTLYIGEIGLSGELRPVRDLTLRLKEAEKKGFKKALVPDYGKIEINSKTF
EIYPLKSLQEVLKLLFGL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcagtgccagagttgtggttataagagtcttaagtggcttggaaggtgtcct
gaatgtggggcctggaatagttttcttgaagaaaaagaggaaagggcttccaaaaaaaga
gagaccaaacctttcagggttttaaagcttgccgaggtatcctatttttccaagccaagg
atttcaacagggctttctgagtttgaccttgtccttggaggtggcattgttccagcctct
ttgattttaatcgggggagatccaggtataggaaaatcaacccttttaacccagatggca
ggttatctcacagagcagggaaaaagggtgctttacttttctgctgaagaatctccagaa
caggttaaattaagaactaaaaggcttcaaatagttgaagacttttattttctctccgaa
acagatttatcccttctctttgaagttgttgaggagataaagccagaggttatcatcgtt
gactctattcaaacggtatatctacctgagcttgcttcttcaccggggagtgtctctcag
gtaagggaatgcgctaatcagttgttaaggcttgcaaaggagaaagatataagtattttt
cttgtgggacacattacgaaggagggggttattgcagggccaaagattcttgagcatctt
gtggatgtggtgctttatcttgagggagagagggaaacgggatttcgtattctcagggcc
atgaagaaccgttttggggcggtaaatgagattggtgtttttgtgatgacagaggctggg
cttaaatctcactcccagtatgaagagctctttcttactggaaaaggggcccccttttgt
atccttgaagggacaagacctctcatagttgaggttcaggccttaacctctaaaagttat
ttgagtttaccaaggcgtcagtccgttggttatgacccgataagactaagccttctttgt
gccatccttgaaaaaaggcttggactctcccttggagataaggatgtctatgttaaagta
gcaggaggattaaggataaccgatccttcagcagaccttgcaatttctgtatctctcctt
tcaagtctctttgagaaggagcttcctcaaaaaacgctctatataggggagatagggctt
tcaggagaattaagacctgtaagagatttgactctcaggcttaaagaggctgaaaaaaaa
ggcttcaagaaagcccttgtgcctgactatggaaagattgagatcaactcaaaaacattt
gaaatttatcctctaaaaagcctacaagaggttttgaaacttctctttggcctataa
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