Caldimicrobium thiodismutans: THC_1524
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Entry
THC_1524 CDS
T04224
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cthi
Caldimicrobium thiodismutans
Pathway
cthi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cthi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
THC_1524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthi03400
]
THC_1524
Enzymes [BR:
cthi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
THC_1524
DNA repair and recombination proteins [BR:
cthi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
THC_1524
RecFOR pathway proteins
THC_1524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
RuvB_C
AAA
AAA_5
AAA_lid_4
Mg_chelatase
Sigma54_activat
TIP49
AAA_22
nSTAND3
bpMoxR
AAA_14
AAA_3
AAA_16
ResIII
NACHT
RNA_helicase
ABC_tran
Sigma54_activ_2
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BAU23889
UniProt:
A0A0U5ASG7
LinkDB
All DBs
Position
complement(1520306..1521280)
Genome browser
AA seq
324 aa
AA seq
DB search
MWDFRPSTLEEFIGQKRLKEELSIYLSSIKKRKEVFPHTLFVGAPGLGKTTLARIIAFEL
RRELKITSGPVLDKPGAVAGILTNLSEGEILFIDEIHRIPKPCQEILYSAMEDFALDILI
GKNQGARSVRLNLPRFTLIGATNKPNLLLGPLLDRFQLSFKLDYYQEEELKDILLKVSSL
WGLKLSEESACKLAKAGKGIPRQALNLLRRLKEFMHHFTPQDSKILEVTEGEIKAFFQLL
DIDEWGLTPEDRRCLFTLYRDFKGGPVGLNSLALSSRISPDELETLYEPALIRLGLMART
RKGRVITKLGEKYLKERNLFHVSL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtgggattttcggccctcaactcttgaggaattcatagggcaaaagcgccttaaagaa
gagctctccatttacctttcttccattaaaaagagaaaggaggtctttccccataccctt
tttgttggagcaccaggccttgggaaaacaactcttgcccggataattgcctttgaactc
agaagggagctcaaaattacctctggtcctgtgcttgataaaccaggagctgtagctgga
atactcactaatctctccgagggagaaatcctctttattgacgaaattcatcgcatccct
aagccctgtcaagagatcctctactctgctatggaagactttgcccttgacatccttatt
ggcaaaaatcaaggagctcgctcagtgagactaaatctgccaagatttaccctaattgga
gctacaaacaagcctaatcttctcttagggccacttctggatagatttcagctctcattt
aagcttgattattatcaggaagaggagcttaaagatatccttctcaaggtgagttccctg
tggggccttaaactctctgaggaatctgcctgcaagcttgctaaagctggcaaaggcatt
ccaagacaggccttaaatctcctgagaagacttaaagagtttatgcatcattttactccc
caggattcaaagattttagaggttacagaaggagaaataaaggccttttttcagctttta
gatattgatgaatggggtctaacccctgaagatcggagatgtttatttaccctgtatcgg
gattttaaaggtggcccagtgggtctcaattcccttgccctttcatcgcgtataagcccg
gatgagcttgaaaccctttatgaaccagctcttatccgtttaggccttatggcccgaact
cgcaaaggaagggttatcaccaaactgggtgaaaaatatctcaaagaaaggaaccttttt
catgtctctctttaa
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