KEGG   Caldimicrobium thiodismutans: THC_1635
Entry
THC_1635          CDS       T04224                                 
Name
(GenBank) RNA polymerase sigma70 factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
cthi  Caldimicrobium thiodismutans
Pathway
cthi02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cthi00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    THC_1635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cthi03021]
    THC_1635
Transcription machinery [BR:cthi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     THC_1635
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2 Crescentin
Other DBs
NCBI-ProteinID: BAU23995
UniProt: A0A0U4W4L2
LinkDB
Position
1635544..1637076
AA seq 510 aa
MNLQNQKTCLFEGEDFLEEDFEETLLEEEVKKVKKDDSLKIYLSEVFNHNLLSKEDEIRI
GKTIEEGEKEILEEAFKYPTQIMKFYSLLRKLERENKLSQYFKDYELLEKKGSFREAWFK
TLREKLLEFLEEELKVDRKRLLEEIFGLIYEVRPTKTLLDELTCEILEVKKKVDDLERVK
INFSQNFKDLKINFEKLISLNGAKGRSRGLSKKLKEEIEGNKELQCFLKEAERKKKEVEI
ALDFFGEPLPSILDSAQRIQKAFFKIKRAKEELVSANLRLIISIARKYAPKGSLLSDLIQ
EGNIGLLRAVEKFDYRKGFKFSTYATWWIRQNITRYLAENTRTIRVPVHIIEAIYKISKI
VYTKFYQEYGREPTLEELSKETGLSVERLSYIFKVMKQPISLETSVGEEEDTTLKDFLED
HNILRPDEVTFNVALSEKIRELLKTLSAREEKVIRLRFGIGERESYTLEEVGQKFGVTKE
RIRQIECHALRKLKHPNRLKLLKNFLYHGS
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgaacctccagaaccagaaaacttgcctttttgaaggggaagattttttagaagaagat
tttgaagagacccttcttgaagaagaagtaaaaaaggtcaaaaaagatgactctcttaaa
atttacctttctgaggtctttaatcataaccttttgtctaaggaagatgaaataagaatc
ggaaagaccattgaagaaggagaaaaggagatccttgaggaggcatttaaatatcctaca
cagataatgaaattttacagcctcttaagaaagctggaaagagaaaataaactatctcaa
tattttaaggactatgaacttcttgaaaaaaaaggttcttttcgagaagcctggtttaaa
acactgagagagaaacttctggaatttttagaagaagagttaaaggttgatagaaaaagg
cttcttgaggaaatctttggtttaatttatgaggtgagacccactaaaacccttcttgat
gaattaacctgtgaaatcttggaggttaaaaagaaagttgatgaccttgagagagttaaa
attaatttttctcaaaattttaaagacttgaaaattaactttgaaaaactcatctcttta
aatggagctaaagggagatcaagaggcctttctaaaaagttaaaagaggagatagagggg
aataaggaattgcagtgttttctgaaagaggctgaaagaaaaaagaaagaagttgaaatt
gccttagatttttttggtgagcccttaccaagtattttagactctgcccagaggattcag
aaagccttttttaaaataaaacgagccaaagaggaattggtaagtgccaatcttaggcta
ataatttccattgccagaaaatatgcccctaagggttctctcctttctgacctaattcag
gaaggcaacattggtcttttaagggcagttgaaaagtttgattatagaaagggctttaag
ttctccacttatgctacttggtggataagacaaaatattacccgctatttagctgagaat
acacgcaccattagggttcctgtgcatataattgaagcaatttataaaataagtaagatc
gtttatactaaattctatcaggaatatggaagagaacctaccttagaagaactttctaag
gaaacgggtttatcagttgaaagacttagttatatctttaaggtaatgaaacagcctatc
tcccttgaaacctcagtgggagaagaggaagacactacccttaaagattttcttgaagat
cataatattctcagaccagatgaagttacttttaatgttgctctttctgaaaaaattcgt
gaacttttaaagaccttatctgctcgtgaagaaaaggtaattagactgcgttttggcata
ggagaaagagaatcctatactttggaggaggtaggacaaaaatttggggtcaccaaggag
agaataagacagattgaatgtcatgccttaagaaaactcaaacatcccaatagacttaaa
cttttaaaaaattttctctaccatggaagttaa

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