Caldimicrobium thiodismutans: THC_1635
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Entry
THC_1635 CDS
T04224
Name
(GenBank) RNA polymerase sigma70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
cthi
Caldimicrobium thiodismutans
Pathway
cthi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cthi00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
THC_1635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthi03021
]
THC_1635
Transcription machinery [BR:
cthi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
THC_1635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Crescentin
Motif
Other DBs
NCBI-ProteinID:
BAU23995
UniProt:
A0A0U4W4L2
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All DBs
Position
1635544..1637076
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AA seq
510 aa
AA seq
DB search
MNLQNQKTCLFEGEDFLEEDFEETLLEEEVKKVKKDDSLKIYLSEVFNHNLLSKEDEIRI
GKTIEEGEKEILEEAFKYPTQIMKFYSLLRKLERENKLSQYFKDYELLEKKGSFREAWFK
TLREKLLEFLEEELKVDRKRLLEEIFGLIYEVRPTKTLLDELTCEILEVKKKVDDLERVK
INFSQNFKDLKINFEKLISLNGAKGRSRGLSKKLKEEIEGNKELQCFLKEAERKKKEVEI
ALDFFGEPLPSILDSAQRIQKAFFKIKRAKEELVSANLRLIISIARKYAPKGSLLSDLIQ
EGNIGLLRAVEKFDYRKGFKFSTYATWWIRQNITRYLAENTRTIRVPVHIIEAIYKISKI
VYTKFYQEYGREPTLEELSKETGLSVERLSYIFKVMKQPISLETSVGEEEDTTLKDFLED
HNILRPDEVTFNVALSEKIRELLKTLSAREEKVIRLRFGIGERESYTLEEVGQKFGVTKE
RIRQIECHALRKLKHPNRLKLLKNFLYHGS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaacctccagaaccagaaaacttgcctttttgaaggggaagattttttagaagaagat
tttgaagagacccttcttgaagaagaagtaaaaaaggtcaaaaaagatgactctcttaaa
atttacctttctgaggtctttaatcataaccttttgtctaaggaagatgaaataagaatc
ggaaagaccattgaagaaggagaaaaggagatccttgaggaggcatttaaatatcctaca
cagataatgaaattttacagcctcttaagaaagctggaaagagaaaataaactatctcaa
tattttaaggactatgaacttcttgaaaaaaaaggttcttttcgagaagcctggtttaaa
acactgagagagaaacttctggaatttttagaagaagagttaaaggttgatagaaaaagg
cttcttgaggaaatctttggtttaatttatgaggtgagacccactaaaacccttcttgat
gaattaacctgtgaaatcttggaggttaaaaagaaagttgatgaccttgagagagttaaa
attaatttttctcaaaattttaaagacttgaaaattaactttgaaaaactcatctcttta
aatggagctaaagggagatcaagaggcctttctaaaaagttaaaagaggagatagagggg
aataaggaattgcagtgttttctgaaagaggctgaaagaaaaaagaaagaagttgaaatt
gccttagatttttttggtgagcccttaccaagtattttagactctgcccagaggattcag
aaagccttttttaaaataaaacgagccaaagaggaattggtaagtgccaatcttaggcta
ataatttccattgccagaaaatatgcccctaagggttctctcctttctgacctaattcag
gaaggcaacattggtcttttaagggcagttgaaaagtttgattatagaaagggctttaag
ttctccacttatgctacttggtggataagacaaaatattacccgctatttagctgagaat
acacgcaccattagggttcctgtgcatataattgaagcaatttataaaataagtaagatc
gtttatactaaattctatcaggaatatggaagagaacctaccttagaagaactttctaag
gaaacgggtttatcagttgaaagacttagttatatctttaaggtaatgaaacagcctatc
tcccttgaaacctcagtgggagaagaggaagacactacccttaaagattttcttgaagat
cataatattctcagaccagatgaagttacttttaatgttgctctttctgaaaaaattcgt
gaacttttaaagaccttatctgctcgtgaagaaaaggtaattagactgcgttttggcata
ggagaaagagaatcctatactttggaggaggtaggacaaaaatttggggtcaccaaggag
agaataagacagattgaatgtcatgccttaagaaaactcaaacatcccaatagacttaaa
cttttaaaaaattttctctaccatggaagttaa
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