Caldimicrobium thiodismutans: THC_1804
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Entry
THC_1804 CDS
T04224
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
cthi
Caldimicrobium thiodismutans
Brite
KEGG Orthology (KO) [BR:
cthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cthi03016
]
THC_1804
Transfer RNA biogenesis [BR:
cthi03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
THC_1804
Prokaryotic type
Methyltransferases
THC_1804
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
MMR_HSR1_Xtn
Dynamin_N
GTP_EFTU
AIG1
cobW
NOG1
Ras
AAA_16
Roc
Guanylate_kin
MCM
AAA_22
DLIC
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BAU24163
UniProt:
A0A0U5AJT8
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All DBs
Position
complement(1800156..1801553)
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AA seq
465 aa
AA seq
DB search
MRSSFYTEDTISAIATPPGRGAIGVIKISGEKSLEILRKIFKPFKPRLSFESHKFYYGFI
IDPETERPVDEVLVVYMKAPFSYTREDVVEIHAHSGYVNLRKILELVLKEGARPAQPGEF
TLRAFLNGRIDLAQAEAIEEIISAKSERALKLALNNLSGRLSEKINTLKERLLYALAQVE
SAIDFPEEDLEIMNPQELSQLIKREIIPEIEKLINSYEEGKIYREGINLVICGKPNVGKS
SLMNALLREERAIVTPIPGTTRDFLEEEAYLQGLPVKLIDTAGLRETEDPVEKIGVERAF
QKLKEADLVLFLVDVSEEPTMEIKHLYQRIQAYPHLVVFNKIDLIPNYLEEWRKTFFKYG
GELIEISVKKELNLDLLTQRIYEKIVSKRATAVSEVMPNLRQKTSLEKAKRHLEDALKEL
QKREPLPELVSIELRSAIGNLSEIIGEITTEDLLSEIFSRFCIGK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgaggagtagcttttacactgaagacactatttccgccattgccaccccgcctggcagg
ggggcaattggcgttattaaaataagtggtgaaaagtccttagagatccttaggaaaatc
tttaaaccctttaaacctcgattgtcctttgaatcacacaagttttattatggttttatt
attgatcctgaaactgaaagacctgtagatgaagttcttgtggtttacatgaaggctccc
ttcagttatacccgagaggatgtggtagagatacatgctcatagtggctatgttaatctg
agaaaaattcttgagcttgtcctcaaagaaggggcaagacctgctcagccaggggaattt
accttacgggcttttttaaatgggcgtattgatcttgctcaagcagaggctatagaagaa
atcatttccgcaaaaagtgaaagggccctgaaactcgccttaaacaatctctcaggaaga
ctttcagaaaaaattaatacccttaaagaaagacttttatacgccctggctcaagtggaa
tctgccattgattttccagaggaagaccttgagatcatgaaccctcaggagttaagccag
ttaatcaaaagggaaataattcctgaaatagaaaaattgataaattcttatgaggaggga
aagatatatagggaaggcataaatcttgtcatatgtgggaaaccaaatgtaggaaaatct
tcccttatgaatgccttacttagagaagaaagggctattgtaactccaatccctggaaca
acacgggactttttagaagaagaggcctatctacaggggcttcctgttaaactcattgat
accgctggcttaagggaaacagaggatcctgttgaaaaaattggtgttgagagggccttt
caaaaattaaaagaagctgatcttgttctctttttggttgatgtgtcagaagaacctact
atggagataaaacatttataccagcgaattcaagcctatccacatttagtagttttcaat
aagattgatctaatccccaattatcttgaggaatggcggaaaaccttcttcaaatatggt
ggggaacttattgagatctctgtaaaaaaagagcttaatcttgatcttttaacccaaaga
atatatgaaaagatagtgtcaaagagggcaacagctgtctctgaggttatgccaaacctt
cggcaaaaaacttcccttgaaaaggctaaaagacaccttgaagatgcccttaaggaactt
caaaaaagggaacctttacctgagcttgtctctatagaactaaggtcagccataggaaat
ttgtctgaaattataggtgagatcactactgaagatcttctctctgaaatcttttctcgt
ttttgcattggaaaataa
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