Carboxydocella thermautotrophica: CFE_0071
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Entry
CFE_0071 CDS
T05389
Name
(GenBank) bacterial nucleoid protein Hbs
KO
K03530
DNA-binding protein HU-beta
Organism
cthm
Carboxydocella thermautotrophica
Brite
KEGG Orthology (KO) [BR:
cthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cthm03032
]
CFE_0071
03036 Chromosome and associated proteins [BR:
cthm03036
]
CFE_0071
03400 DNA repair and recombination proteins [BR:
cthm03400
]
CFE_0071
DNA replication proteins [BR:
cthm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CFE_0071
Chromosome and associated proteins [BR:
cthm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CFE_0071
DNA repair and recombination proteins [BR:
cthm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CFE_0071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
Peptidase_C80
Lmo2446-like_N
Motif
Other DBs
NCBI-ProteinID:
AVX19288
UniProt:
A0A2R4MWR2
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All DBs
Position
76152..76424
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AA seq
90 aa
AA seq
DB search
MNKTDLVNSVAEKAELTKKDAEKAVNAVFASIEEALKKGEKVQLVGFGTFEVRSRGERKG
RNPQTGEEITIAAAKVPAFKAGKALKEAVM
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaaaccgatctggtaaacagcgtagccgagaaagctgagctgaccaagaaagat
gctgaaaaagccgtaaatgctgtctttgcttcaattgaagaagcactgaaaaaaggggaa
aaggtacaactggttggttttggtacttttgaagttcgctcccgtggcgagcgcaaaggc
cgtaacccgcaaactggtgaagaaattaccatcgctgctgccaaagtacctgctttcaaa
gccggtaaagctctgaaagaagctgtaatgtaa
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