Carboxydocella thermautotrophica: CFE_0106
Help
Entry
CFE_0106 CDS
T05389
Name
(GenBank) lysyl-tRNA synthetase, class II
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cthm
Carboxydocella thermautotrophica
Pathway
cthm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cthm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CFE_0106
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cthm01007
]
CFE_0106
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cthm03016
]
CFE_0106
Enzymes [BR:
cthm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CFE_0106
Amino acid related enzymes [BR:
cthm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CFE_0106
Transfer RNA biogenesis [BR:
cthm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CFE_0106
Prokaryotic type
Other AARSs
CFE_0106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AVX19323
UniProt:
A0A2R4MWV9
LinkDB
All DBs
Position
106725..108197
Genome browser
AA seq
490 aa
AA seq
DB search
METQERELNELLLVRREKLQELRNKGIEPFGGKFERTHLSQEIIDNFGELEGQKVIIAGR
IMAKRGHGKASFAHLQDGAGLIQIYVRVNDVGEENYELFVKADIGDIIGVEGTVFKTQRG
EITVSATKVTMLAKSLRPLPEKWHGLKDVELRYRQRYVDLIVNPEVKQTFILRSRIIRAI
RNFLDQKGFLEVETPMMQPIAGGAAARPFITHHNALDMTLYLRIAPELYLKRLLVGGFEK
VYEINRNFRNEGISTKHNPEFTMLELYQAYADYNDMMRLTEELISTVAQEVLGTTRIVYQ
GTEIDLAPPWRRVPMLEAIKEHTGIDFTRINTDEEALQAAKSVGVELDKQATRGDVINEV
FEAKVEPHLIQPTFIIGHPVEISPLAKRNAEDPRYTDRFELFIFAREMANAFSELNDPID
QKERFLKQVEKRSAGDDEAHMMDEDYINALEYGMPPAGGLGIGIDRLVMLLTDSPSIRDV
ILFPHMRPRD
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggaaacacaggaacgggaattaaatgagctgctactggtaagaagagaaaaactacag
gaattgcgtaataaagggattgagccatttggtggcaaatttgagcgtacccacttaagc
caggaaattatcgataactttggtgagttagagggacaaaaggttatcattgcagggcga
atcatggccaaaagaggccatggcaaggcatcatttgctcatcttcaggatggggcaggt
ttgattcaaatttacgtcagagttaatgatgttggagaagaaaactatgaactctttgtt
aaagctgatataggcgatattatcggagtggaaggaacagtattcaaaacccagaggggt
gaaatcactgtttctgctacaaaagtgactatgctggccaaatccctgcggcctcttccg
gaaaagtggcatggtctaaaggatgttgaattgcgttatcgccaacgctatgtagatttg
attgtgaacccggaagttaagcaaacttttattttacgcagcagaattatccgggccatc
cgcaacttcctggaccaaaagggcttcctggaagtggaaacacccatgatgcagcccatt
gcagggggagcagctgcccgccccttcattacccatcataatgcccttgacatgacgtta
tatttgcggatagcaccagaactgtatttaaaaaggttactggttggcggctttgagaaa
gtatatgaaataaaccgtaactttagaaacgaaggcatttctacaaaacataatccggag
ttcactatgcttgagttataccaggcctatgctgattacaatgatatgatgaggttgacg
gaggagctgatttctactgtcgctcaagaggttcttggtacgactcgaattgtttatcaa
gggactgaaatagacctggcgcccccctggcgaagagtccctatgctggaggcaattaaa
gagcacactggtattgactttacaagaattaataccgatgaagaagcactgcaagctgct
aaatcggtaggtgtagagctagataaacaggctacgcgcggagatgttattaatgaggta
tttgaagcaaaagttgaacctcatttaattcaacctacatttattatcgggcatccggtt
gaaatttcccctctggctaagcgtaatgcggaagatccgcgctacactgaccggtttgag
ttatttattttcgcccgcgaaatggccaatgctttttctgaattaaatgatcctattgat
caaaaagagcgctttttgaaacaagttgaaaagcgtagcgccggcgacgatgaggctcat
atgatggatgaggattacataaatgcactggaatatggaatgccgcctgctggtggactg
ggtatcggtatcgaccggctggtgatgctattaaccgactcgccatcaatacgggatgtt
atcttatttcctcatatgcgtccaagggattaa
DBGET
integrated database retrieval system
