Carboxydocella thermautotrophica: CFE_0538
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Entry
CFE_0538 CDS
T05389
Name
(GenBank) UPF0042 nucleotide-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
cthm
Carboxydocella thermautotrophica
Brite
KEGG Orthology (KO) [BR:
cthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthm03019
]
CFE_0538
Messenger RNA biogenesis [BR:
cthm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CFE_0538
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_33
AAA_18
AAA_22
AAA_16
AAA_28
CoaE
AAA_29
AAA_24
AAA_27
AAA_23
PRK
Motif
Other DBs
NCBI-ProteinID:
AVX19737
UniProt:
A0A2R4MY48
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All DBs
Position
540147..541037
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AA seq
296 aa
AA seq
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MKDISLIIITGLSGAGKSTAVRAFEDMGFFVVDNLPPALVSKFVELTRQVKGQPYRYALV
MDMRGGRFFDQMQEALDYLQQQKVDYRILFLEAADEVLVRRFKETRRRHPLAGGGTVLDG
IRRERAKLEELRGRAHRIIDTSSLKPAELKEEIFRAFQPEEEGARLSITVMSFGYKYGIP
LDADLVIDVRFLPNPFYIKELRPLTGNDPEVQEYVVSREETKKFLDKFLDLITFLIPEYI
KEGKTSLTIAIGCTGGQHRSVTLTNRLAELLADRGDKSYRVEVRHRDIQREKGREI
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatatcagtctgattatcatcaccggcctttccggggccggcaaaagtacggcg
gtgagggcttttgaagacatgggctttttcgtggtggacaatttgcctccggccctggtc
agcaaatttgtggaattgacccggcaggtcaaaggccagccttatcgctatgccctggta
atggatatgcggggcggccggttttttgaccagatgcaggaagccctggattatctgcaa
caacagaaagtagattaccgcattctgttcctggaggcggctgatgaggtgctggtccgc
cgctttaaggaaaccagaaggcgccatcctctggctggcggggggacagtgctggatggc
atcaggcgggagcgggccaagctggaagaactaaggggccgggcccatcgcattatcgat
acctcaagtctgaagccagctgaacttaaagaagaaattttccgggccttccagccggaa
gaggaaggggcccggctcagcattacagttatgtcttttggctacaaatacgggatcccg
ctggatgcggatctggtaatagatgttcgtttcctgcccaatcccttttatatcaaggag
ctcaggcctttaaccggcaatgacccggaggtgcaggaatacgttgtctcccgggaagaa
actaaaaagtttctggacaaatttctggatttaatcactttccttattcccgaatatatt
aaagaaggcaaaaccagtttaactattgccattggttgtaccgggggccagcaccgctct
gtgaccctgaccaatcgtctggccgaattgctggctgacaggggggataaatcctatcgg
gtagaggtgcgccaccgggacattcaacgggaaaaagggagggaaatttag
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