KEGG   Carboxydocella thermautotrophica: CFE_0686
Entry
CFE_0686          CDS       T05389                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cthm  Carboxydocella thermautotrophica
Pathway
cthm03030  DNA replication
cthm03410  Base excision repair
cthm03420  Nucleotide excision repair
cthm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cthm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CFE_0686
   03410 Base excision repair
    CFE_0686
   03420 Nucleotide excision repair
    CFE_0686
   03440 Homologous recombination
    CFE_0686
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cthm03032]
    CFE_0686
   03400 DNA repair and recombination proteins [BR:cthm03400]
    CFE_0686
Enzymes [BR:cthm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CFE_0686
DNA replication proteins [BR:cthm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CFE_0686
DNA repair and recombination proteins [BR:cthm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CFE_0686
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CFE_0686
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5 HHH_2 HHH
Other DBs
NCBI-ProteinID: AVX19885
UniProt: A0A2R4MYF8
LinkDB
Position
686738..689266
AA seq 842 aa
MKKLLLIDGNSLVHRAYWALPPLTTGSGVPTNAVFGFLNMLLKLLEEEKPDLVAVAFDAG
RPQYRLELYPEYKGHRPKTPDDLRPQFPLVKEVLEALRIARCELEGYEGDDIIGTLVERA
RTEGGIRSLIVTGDKDSLQLIDEQTEVLLCRKGISDLERYNFENLTEKTGLQPAQMLDLK
GLMGDSSDNIPGVPGVGEKTALKLLQQYGSLENLYQNIGEIAGKLKEKLLQGRELAFMSR
DLARIRRDVPLAFSWEELRRRQPDYPRLQEMLTKLEFKTLLKRFGDTTSAEIEVRAEEPA
VVPGSEADWQRLLAGAREAGYLVVGYNPYGSGDARFKIEEFWLAAEQGELAFPLTRERVQ
TLVGLGLPVITYDVKTLNWGLSNALGQAVWLNPAGDLLLARYLLDPGKKQEPPAGSLLKA
WEQAREQLEARDLTHLLTEVEQPLAELLFRMERTGIRVDAGELEQMGQELQAAIQRLTGE
IYQLAGEEFNLNSPKQLGEILFNKLGLPVLKKTKTGFSTSAEVLEELALHHPIVEKILEY
RQLAKLQSTYIAGLQQLLGADGLIHTTFNQAVTATGRLSSTEPNLQNIPVRLELGRRIRK
AFRPLEPGHKLLSADYSQIELRILAHFSGDPELVAAFRHGEDIHTKTASQVFGVPREAVT
REMRRAAKAVNFGIVYGLSDFGLARDLKISRTEARAYIESYFRQYPGVKDYINQTIARAK
EQGYVTTLLGRRRYLPDLFSSNRNVRAFGERTAVNTPIQGTAADIMKVAMLKADAALKRT
GLKARMLLQVHDELIFDVPAEEVREVARVLREAMDTAVQLTVPLEVEVKAGDNWYDMSQL
EV
NT seq 2529 nt   +upstreamnt  +downstreamnt
atgaaaaaactgctgttaattgacggcaatagtctggtacatagagcttactgggccttg
cctcccctgactaccggttcgggggtacccaccaatgccgtctttggttttcttaacatg
cttttaaaattgctggaagaggaaaaacctgacctggtggcagtagcttttgatgccggg
cgtcctcagtaccggctggagctgtatccggagtacaagggacaccggcccaaaactcct
gatgacctgcggccccagtttcccctggtcaaggaagtgctggaggctctgcgcatagcc
cgctgtgagctggagggctatgaaggagatgatatcatcggcaccctggtggaaagggcc
aggacagaagggggaatcaggagtctaattgtcaccggggataaggatagtttacagctg
atcgatgaacagacggaagttttgctgtgccggaaaggcatcagtgatctggagcggtat
aattttgagaatttaacggaaaagacgggactgcaaccggctcagatgctggatttgaag
gggctgatgggggacagttctgacaatattcccggtgtaccgggggtaggggaaaaaacc
gccctcaaactgttacagcaatatggcagcctggagaacctttatcagaacataggggag
attgccgggaaactgaaggaaaagctgctccagggtcgggaattggcttttatgagccgc
gacctggcccggatacgccgggatgtacctctggctttcagctgggaggaactcaggcgc
cggcagcctgattatccccgtttgcaggaaatgctgaccaaactggagtttaaaaccctg
ctcaaacggttcggagatacaaccagtgctgaaattgaggtgagggcagaggaaccagcg
gtagttcctggcagtgaagcagactggcagcgtttgctggccggagcccgggaggcagga
tacctggttgtgggatataacccttatggcagtggcgatgccagatttaaaatcgaagag
ttctggctggcagcggaacagggagagctggcttttcctctgacccgggagcgggttcaa
acgctggtcgggctgggtttgcccgtaattacttatgatgtaaaaaccctgaactggggt
ctaagcaatgctctggggcaggcggtctggttgaatccagcaggagatttactgctggcc
cgatatttactggatccgggcaagaaacaggaaccaccggccggttcactgctaaaagcc
tgggaacaggcccgggaacagttagaagccagggatttaacccatttattgactgaggtg
gaacagcccctggctgagctgctgttccgcatggaacggactggaataagggttgatgcc
ggggagctggaacagatgggccaggagctgcaggcagcgatccagcgcttgaccggggaa
atttaccagctggcgggggaggagtttaaccttaattctcccaaacagctgggggaaatt
ctctttaataaactgggtttaccggtgctaaagaaaaccaagaccggtttttccaccagt
gccgaagtgctggaagaactggctctgcatcatcctatcgtggaaaaaatcctggagtac
cggcagctggccaaactgcagtctacctatatagccggcttacaacagttactgggggct
gatgggttgatccatactacttttaatcaagccgttactgcgaccggacggttaagcagc
accgaacccaatttgcagaatattccggtgcggctggaactgggccgccgcatccgcaag
gcctttcggcccctggaaccgggacataaattgctttctgccgactattcccagatcgag
ctgcgcattctggctcatttcagtggggatccggagctggtggcagcattccggcatggg
gaagacattcataccaaaaccgccagccaggtctttggcgtaccgcgggaagcggtaacc
agggaaatgcggcgggcggccaaagcggtcaattttgggattgtctacgggctcagtgac
ttcggtttggcccgggatctgaaaatcagccggacggaagccagggcctatatcgaaagc
tattttcgccagtatcccggggttaaggactatattaaccagaccatagcccgggccaaa
gagcaaggctatgtcactactctgctgggacgccgccgctatttgccagatctgttcagc
agtaaccggaatgtccgggcttttggcgagaggacagcagtgaataccccgattcagggg
acagcggcggatattatgaaagtggcgatgctgaaagccgatgcggccctgaaaagaacc
gggctcaaggccagaatgctgctgcaggtccacgatgaactgatttttgatgtaccggcg
gaagaagtccgggaagtagcccgggttctcagggaagcaatggacacagcagtacagctg
acagtgcccctggaagtggaagttaaggccggagataactggtatgatatgagtcagctg
gaggtgtaa

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