Carboxydocella thermautotrophica: CFE_0915
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Entry
CFE_0915 CDS
T05389
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
cthm
Carboxydocella thermautotrophica
Brite
KEGG Orthology (KO) [BR:
cthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cthm03009
]
CFE_0915
Enzymes [BR:
cthm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CFE_0915
Ribosome biogenesis [BR:
cthm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CFE_0915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
DDE_Tnp_1_2
PNGase_A_C
RluD_N
Motif
Other DBs
NCBI-ProteinID:
AVX20113
UniProt:
A0A2R4MZ45
LinkDB
All DBs
Position
908304..909305
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AA seq
333 aa
AA seq
DB search
MKVNEFWPEDEEDLESEAETAEVEERSWQVEREWAGTRLDLALARKYDDLSRSRVQTLID
EGQVQVNGQKTKANYKLKAGDEVNLQVPAPRPLTVEPEPIPLEVVYEDQDVIVINKPRGL
VVHPAVGHWTGTLVNALLWHCKDLSGINGQLRPGIVHRLDRDTSGLLMVAKNDWAHQQLA
LQIKERSVNRRYLALVHGNITEPAGIVDAPIGRDPKDRQRMAVNVKNGKPALTRYWVKER
FGDYTLLECKLETGRTHQIRVHMAYLGFPVVGDPKYGPQKAHFGLAGQMLHAYLLGFKHP
RTGEYLEFTAPLPAEMEDVLAQLRRRYAAASEN
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttaatgaattctggcctgaagatgaagaggatctggaatctgaggctgaaaca
gctgaggtggaagaacgaagctggcaggtagagcgagagtgggcgggcaccaggctggat
ttagcattggccagaaaatatgatgatttgagtcgcagtcgcgtacaaactctcattgat
gaaggtcaggttcaggttaatggtcaaaaaacaaaagccaactataaattaaaagctgga
gatgaagtcaatctgcaggttcctgctcctcggcccctgacggtagagccggagcccatt
cccctggaggtggtctatgaggaccaggatgtaattgttatcaataaacccaggggcctg
gtggtacatccggcggtaggtcactggacggggacactggtcaatgccttgctctggcat
tgcaaggacctgtcaggtatcaatggccagctgcggccggggattgtccaccgtctggac
cgggatacttccggccttctgatggtggccaaaaatgactgggcccaccagcagttggcc
cttcagatcaaggaacgttcagtcaaccgccgctatctggctttagttcatggtaatatc
acagagccagcgggaatagtggatgcacctatcggccgggatcctaaagaccggcaacgc
atggcagttaacgtcaaaaacgggaaacctgcacttacccggtactgggtgaaagagcgc
tttggtgactataccctgttggaatgtaaactggaaacaggtcgcacccaccaaattcgg
gtacacatggcctatctgggctttccggtagtaggggaccccaagtatggcccccaaaaa
gcccattttggcctggcagggcaaatgctccatgcttacctgctggggtttaaacatccg
cgaacaggggaatatctggaatttactgctccacttccggcagagatggaggacgtactg
gcacaattgcgaaggaggtatgcagcagcttcagaaaactag
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