Carboxydocella thermautotrophica: CFE_0954
Help
Entry
CFE_0954 CDS
T05389
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
cthm
Carboxydocella thermautotrophica
Pathway
cthm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cthm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CFE_0954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthm03400
]
CFE_0954
Enzymes [BR:
cthm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CFE_0954
DNA repair and recombination proteins [BR:
cthm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CFE_0954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RMI2
RecJ_OB
BLH_phosphatase
Motif
Other DBs
NCBI-ProteinID:
AVX20152
UniProt:
A0A2R4MZ91
LinkDB
All DBs
Position
948945..950162
Genome browser
AA seq
405 aa
AA seq
DB search
MTGKTFWTVTELNSLIKQSLETNYLLKRVWIKGEIAEFTRHRLSGHCYFTLKDQESQLKC
VMFRQQAANLRFQPRAGMEVLVLGSINVFLPNGIYQLYAEDIQPYGIGSSQLQLEQLKRK
LEAEGLFSTARKRPLPPLPRRIALVTSRQGAAVRDMVKILRQRFPIIEIVIVDVQVQGEE
APASIKAGLELAAAHTGADLVIVGRGGGATEDLAAFNSEIVVRAIAACPLPVIAAIGHES
DVTLADLVADVRASTPSNAAELAVPVLQELLGRTAEMAQRLRAAISNRFRWERQQLEQLA
SRPILQQPQLYFERKWQEVERIAGKLQTAAENVYLQKQHRLEKTVAALNALSPLKVLERG
YAFCRREQEVVTSVEQVQTGQGLTLHMKDGEVDCQVQAVRRKMNG
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgacgggaaaaactttctggacagtgacagaactgaacagcctgatcaaacagagcctg
gagaccaattatctgcttaaaagagtctggattaaaggggagatagcggaatttacccgc
catcgcctttccggtcactgctattttaccctgaaagaccaggaaagccagcttaaatgc
gttatgttccggcaacaggcagccaatctacgttttcaaccccgggccggtatggaggtg
ctggtcctgggcagtatcaatgtttttctgccgaatgggatctatcagctctacgccgaa
gatatccagccctatggcattggcagcagccagttgcagctggaacagctgaagcgtaaa
ctggaggcagaggggctgttcagcactgcccgcaaaaggcctttgccgcctttacctcgt
cggatagccctggttacttcccggcagggagcagcagtacgggatatggtaaaaatactg
cgccagcgttttcccattattgagatcgtgattgtggatgtgcaggtacagggtgaagag
gcgcctgcctccatcaaagctggattagaactggcagcagctcacacgggggcagacctg
gtgattgtaggtcgaggcggaggagccactgaagatctggctgccttcaattcggaaata
gtagtacgggccattgctgcctgtcccctgccggtgattgctgctatcgggcatgaaagt
gatgttaccctggctgatctggtggctgatgtccgcgcttccaccccttccaatgcggcg
gaactggcggttccagtcttacaggaactgctgggccgtacggcagaaatggcccagcgc
ttaagggctgctatcagcaatcgttttcgctgggaacgacagcagctggaacaactggct
tcccggcctatattgcagcaacctcagctctattttgagcggaaatggcaggaggttgaa
aggatagcaggaaaattgcagactgctgccgaaaatgtatatctgcaaaaacagcatcgc
ctggagaagacagtagcagctctaaatgctttaagtcctttaaaggtgctggagcgaggt
tacgccttctgccgaagggaacaggaagtagtgacttcagtagaacaggttcagactgga
caaggactgaccctgcatatgaaggatggggaagtagattgtcaagttcaggcggttagg
aggaaaatgaatggataa
DBGET
integrated database retrieval system
