Carboxydocella thermautotrophica: CFE_0956
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Entry
CFE_0956 CDS
T05389
Name
(GenBank) farnesyl-diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cthm
Carboxydocella thermautotrophica
Pathway
cthm00900
Terpenoid backbone biosynthesis
cthm01100
Metabolic pathways
cthm01110
Biosynthesis of secondary metabolites
Module
cthm_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
cthm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CFE_0956
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cthm01006
]
CFE_0956
Enzymes [BR:
cthm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CFE_0956
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CFE_0956
2.5.1.29 geranylgeranyl diphosphate synthase
CFE_0956
Prenyltransferases [BR:
cthm01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CFE_0956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AVX20154
UniProt:
A0A2R4MZC0
LinkDB
All DBs
Position
950392..951291
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AA seq
299 aa
AA seq
DB search
MDLQKWQEQLLAKNRLVEDWLEEVLPGPELEPGRLHEAMLYSLFAGGKRLRPALVLGAVE
AVGGEVQAALPAAAALEMIHTYSLIHDDLPAMDNDDYRRGKPTNHKVFGEATAILAGDAL
LTLAFELLAAHLPGAGVSPEIALRVIREIAEAAGTQGMIGGQMADMEAQGQQVNGEQLEK
IHRRKTGALFRAAVRVGGLIGGATPEQLAALSHYAEQLGLAFQITDDILDITGDPAKMGK
DKNSDLKNCKATYPSLYGLEQARIMAEKAVTAAITALGIFGAKAEFLKETALFLLKREQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcaaaagtggcaggagcaattactggcaaaaaacagactggtagaggactgg
ctcgaagaggtgttacccggaccagaactggagccagggcgcctacatgaggctatgctc
tatagtctttttgccgggggcaaacgtttacgcccagccctggttttgggggctgtggaa
gcagtagggggagaagttcaggctgctctgccggcagcagcagcactggaaatgatccac
acctattccctgattcatgatgatttgccggctatggataatgatgattaccgccggggt
aaacctaccaatcataaggtctttggtgaagcaacagccattctggcaggagatgccctg
ttgaccctggcctttgaattgctagccgcgcatttaccgggggctggtgtaagtccggaa
atcgcattacgggtaatcagggaaattgccgaggctgcaggtactcagggcatgattggt
gggcaaatggcggatatggaggcccaggggcaacaagttaatggggaacagctggaaaaa
atccatcgccgcaaaacgggggcccttttccgggcagctgtcagggtgggaggcctgata
ggtggtgctacccctgaacaactagcagctttatcccactatgctgaacaactgggcctg
gcttttcaaatcaccgatgatatcctggacattaccggagacccggccaaaatgggcaag
gataaaaattcagacctgaaaaactgcaaggccacctatccttcactatatggactggaa
caggcccggatcatggcggaaaaggctgtaaccgctgccattacggctttagggattttc
ggcgcaaaggctgaatttttgaaggaaacagctttatttttattaaaacgagagcaatag
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