Carboxydocella thermautotrophica: CFE_1035
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Entry
CFE_1035 CDS
T05389
Name
(GenBank) RNA polymerase sigma factor
KO
K03093
RNA polymerase sigma-I factor
Organism
cthm
Carboxydocella thermautotrophica
Brite
KEGG Orthology (KO) [BR:
cthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthm03021
]
CFE_1035
Transcription machinery [BR:
cthm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CFE_1035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
HTH_16
Motif
Other DBs
NCBI-ProteinID:
AVX20230
UniProt:
A0A2R4MZK0
LinkDB
All DBs
Position
complement(1026066..1026788)
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AA seq
240 aa
AA seq
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MEELVLRAQQGDRQLREQLLQEYQPFIVKIASQTVGRFLNWGVDEELNIALTAFDEAILR
FQQKKGTPFLPFAALVIRSRLLDWLRAEQRHQHLSLDIENEQEEDFSPAELQLSLAQYQA
RSLAEERGLELALLEEKLRPFAISFNDLVDSAPRHRDTKQALVKAARYLAQNQSLFQQLL
EKKTVPAKQLAEVSGVSLKTLEKGRKYLIAVALILHDATEFVHLIYYLKPLLQLEEREQE
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggaggaactggtactccgggcccagcaaggggatcgtcaactcagggaacagctcttg
caggaatatcaaccatttattgttaaaatagccagtcagacagtagggcgttttctaaac
tggggagtagatgaggaactaaatattgcactgaccgcctttgatgaagccatacttcgc
tttcaacagaaaaagggtactccctttcttccttttgccgctctggtaatccggagccgg
ctgctggactggctgcgggccgaacagcggcaccagcatctcagtctggatattgaaaac
gaacaggaagaggatttcagtcccgctgaactgcaactttctctggcccagtatcaagcc
cgttccctggcggaagagcgcggactggaactggccctgctggaagaaaaacttcgacca
ttcgccattagctttaatgacctggtggactcagcccccaggcacagggataccaaacag
gcattagtcaaagctgcccgctacctggcccaaaatcaatccttatttcagcaattgctg
gagaaaaaaactgtgcccgcgaagcagctggctgaagtgagcggtgtcagcctgaagacc
ctggaaaaggggcgcaaatatctgattgctgtggctttgattctacatgacgcaacggag
tttgttcacttaatctattatctcaaaccactgttacaactggaagagagggagcaggaa
tga
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