Carboxydocella thermautotrophica: CFE_1122
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Entry
CFE_1122 CDS
T05389
Name
(GenBank) replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cthm
Carboxydocella thermautotrophica
Pathway
cthm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cthm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CFE_1122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthm03400
]
CFE_1122
Enzymes [BR:
cthm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFE_1122
DNA repair and recombination proteins [BR:
cthm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CFE_1122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_19
PIF1
SLFN-g3_helicase
MerR_1
DAP3
RecA_N
nSTAND_NTPase5
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AVX20317
UniProt:
A0A2R4MZU1
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All DBs
Position
1115669..1118119
Genome browser
AA seq
816 aa
AA seq
DB search
MGKNPVYAEVYIDRPVKELDRPLTYRIPDQLQGQVRPGMRVQVPLGRQGRVQAFVTAITD
QRPPVQVRDIIGLIDREPIIDEELLGLARWLADYYVCPLVTAIHTLVPPGKKNSGGTLVA
LTPRGWAYLNQQDDEEEEAGLEMLEWLAARGGEADAPSLRAMFRSQGQQVLKKLQAAGLV
QVEQFKMVGEKGTGKLGIYPAFPPEELAVHLLSLSPRASKSRQALTVACAVPGLTVKELA
ARAEVTESVIRGLLDKGLLCQKAISLQAEQPERKVVWPRLTPAQQAAFQTIEESIVKGRR
KKFLLFGVTGSGKTEIYLRAIASCLERGQTAICLVPEISLTPQISARFKERFGADVAVFH
SRLSLRERHLEWQRIKEGKIKVVVGARSAIFAPLQKLGLIIIDEEHETSYKQDVTPRYHA
REVAQERARRTGATLVLGSATPAVETFYRAQQGEFTLLTLAERIDDRPLPPVTVVDMRQE
LAEGNRSIFSRELQEALRHTLQRGEQAILFLNRRGYSTFVSCRSCGYVLRCPACDVTLTY
HSSDQTVRCHYCEHREPSPALCPRCNSRYIRYFGAGTQRVAEEFAREFPGVSWQRMDVDT
TSRRGAHETIIQNMLEEKIQVLIGTQMIAKGLDFPKVTLVGVISADTSLNVPDFRSGERT
FQLLTQVGGRAGRDVLPGRVIIQTYSPEHYSILRAVEHDYPGFYREELELREMLGNPPFS
YLVRLLLSGPREEEVIRGSQLICDWLQPGLQADQSLLGPAPAPLSRLRGQYRWHLAIKGP
ELEGLRSLGREVLQKWSKQRSGEVRLVLDIEPVSLL
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaatcctgtttatgccgaggtatatatagatagacctgtaaaagaactggac
cgccccctgacctacaggatcccggaccagctccagggccaggtgcgtcctggcatgcgc
gtgcaggttccgctgggcagacaggggcgggtacaggcttttgtaacagccatcaccgac
cagcgcccaccggtacaggtacgggacataataggactaatagaccgggagcctattata
gatgaggagctgctgggtttggcccgctggctggcagactattatgtttgtccgctggta
acagcaattcataccctggttccgccgggtaaaaagaactctggtggtactctggtggcc
cttactcccaggggctgggcctatttaaatcagcaggatgatgaggaagaagaggctgga
ctggaaatgctggagtggctggctgcccggggcggcgaggctgatgctccttccctgcgg
gcgatgttccggagccagggacaacaggtgctaaaaaagttgcaggcagccggcctggtt
caggtggaacaatttaaaatggtgggcgagaaagggaccggcaagctcggtatttatcca
gcctttccgccggaggagctggcagtacatttgctcagtctttcaccccgggccagcaaa
agccggcaggccttaacggtcgcctgtgctgtaccgggcctgacggtaaaggagctggcg
gcccgggcggaagtaaccgagagcgtaattagaggcttgctggacaaggggctcctctgt
caaaaagctatttcacttcaagcagagcaaccagaacgcaaggtagtctggccccggtta
actccggcccagcaggccgcttttcagactatagaagagagcatagtaaagggcagaagg
aaaaaattcctgcttttcggagtgacaggcagtggcaaaaccgagatctacctgcgtgcc
attgctagctgtcttgaaagaggccagacagcgatttgtctggtcccggaaatttccctg
accccgcaaatttcagcccgttttaaggaacgatttggagcagatgtagctgtttttcac
agccgcctgtctttgcgggaacggcatctggagtggcaaagaattaaagaaggcaaaatt
aaagtagtagtcggggcccgctctgctatcttcgctcctctgcaaaaactggggctaatc
ataatcgacgaggagcatgaaaccagttacaaacaggatgttaccccccgttatcatgcc
cgggaggtggcccaggaacgggccagacgaacaggggctaccctggtgctgggcagtgcc
actccggcagttgagaccttttaccgcgcccagcagggggaattcaccctcttgaccctg
gcggaaagaatcgatgatcggcctctgccgccggtgactgtggtggatatgcgacaggaa
ctggcagagggcaatcgcagcattttttcccgggaactgcaggaagctctccgacatact
ctgcagcggggggaacaggcgattctgtttttgaatcgccggggctacagtacttttgta
tcctgccgcagctgcgggtatgtgctgcgctgtcctgcctgtgatgtgactttgacctat
catagttcggaccagacggtacgctgtcattattgtgaacacagagaaccttccccggcc
ctttgtccccggtgtaattccaggtatatccgttattttggggcaggtacccagcgggtg
gcagaggaatttgcccgggagtttccaggtgtgagctggcagcggatggatgtggatact
accagtcgtcggggagcccatgaaactatcattcagaatatgctggaagaaaaaattcag
gttctaatcggcacccagatgattgccaagggcctggattttcctaaagtaactctggtc
ggtgtgatttctgccgatacttccctgaatgttcccgatttccgttcaggggaaaggact
tttcagctcctgactcaggtgggcggtcgggctggccgggatgtcctgccggggagggtg
attattcagacctattcgccggaacattacagcattttacgggcagtagaacatgattat
ccgggtttttaccgggaggagctggagctgagggaaatgctgggcaatccccctttcagc
tacctggtccgtctactgcttagcgggcccagggaagaggaagtaatcaggggcagtcag
ctgatctgtgactggctgcaaccgggattgcaagcggatcagtccctgctggggcccgcc
ccggcgcctctgtcccgcttgcggggccagtatcgctggcatctggccatcaagggcccg
gagctggagggattacgcagcctgggccgggaagtgttacagaaatggagcaagcaacgc
agtggggaagtgcgtctggttctggatattgaaccagtcagtttgctataa
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