Carboxydocella thermautotrophica: CFE_1215
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Entry
CFE_1215 CDS
T05389
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
cthm
Carboxydocella thermautotrophica
Pathway
cthm00900
Terpenoid backbone biosynthesis
cthm01100
Metabolic pathways
cthm01110
Biosynthesis of secondary metabolites
cthm03010
Ribosome
Module
cthm_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
cthm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CFE_1215
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CFE_1215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cthm03011
]
CFE_1215
Enzymes [BR:
cthm01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
CFE_1215
Ribosome [BR:
cthm03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CFE_1215
Bacteria
CFE_1215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
S1_2
OB_RRP5_4th
CoA_binding_2
DUF2110
DUF2187
DUF3708
Fe-ADH_2
Motif
Other DBs
NCBI-ProteinID:
AVX20405
UniProt:
A0A2R4MZW7
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All DBs
Position
1205781..1207709
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AA seq
642 aa
AA seq
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MEIILARAAGYCFGVKRAIQVAEAAARETGSQIYTYGPLIHNRQAVAKLEEQGIKVIENL
DSAAGEVVIIRSHGVGPEILNKAEELKIKLVDATCPFVKKAQEIARSLQADGYTVIVVGE
AEHPEVKGIIGWTEGKGIVVQQPEDLQLIKPGKKIGVLAQTTQPLARLQAVVKELLTFGR
EVRVFNTICHATEERQQAARELASQVEVMLVVGGAHSANTQKLAAICRESGATTYAIETA
AEIQTDWFKGVDKVGITAGASTPDWIIEEVVKKMTDIRQNEQTEQNPQDMEQLLNEALEF
QRVSRGQKLKGTVVSVSDDEVLVDIGAKSEAVVPLRELTCCPVESAREYVKPGDEIEVVV
LKVEDMEGRIVCSKQKADAMKAMNTLEEAYKTGQKVTGRVAEVIKGGLLVDLGVRAFLPA
SHVDVRYVENLEKYVGQEVAVKIIEFNRQKARVVVSRKAVIEEEQLQKKTNALATLAPGQ
IVKGKVRRITSFGAFVDLGGIDGLLHISELAWHHVDHPAEVIREGEEIEVKILDIDQANE
KISLSRRQVLPSPWETVEKKYTVGSIVKGKVVRLVPFGAFVELEPGVDGLIHLSQLADRR
VAKADEVVQPGQEVLVKVIDVKSDEKRISLSLKEAQGVVPEA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
ttggaaattatcttagcccgcgctgccggttactgtttcggagtgaaacgagccatccag
gtggctgaagcagcagcccgggaaactggcagtcaaatatacacttatggaccgttaatt
cataaccggcaggctgttgccaaactggaagaacagggaataaaagttatcgaaaatttg
gattctgctgctggtgaagtggtgattatccgttcccatggagtgggcccggagattcta
aataaggctgaagagttgaagataaagctagttgatgctacctgcccttttgtcaaaaag
gcccaggaaattgctcgttctttacaagcagatggatatactgttatcgtggtaggagaa
gccgaacatccggaagttaagggcatcatcggttggaccgaaggcaaagggattgtagtt
cagcaaccggaagatcttcaactgattaagccagggaaaaaaattggcgttctggctcaa
accacacagcctttagccagattgcaggcggtagttaaagaattgctgacttttggccgg
gaagtaagggtttttaacaccatctgccacgctacggaagaaagacaacaggcggcacgg
gaattagcaagccaggtggaagttatgctggttgtaggtggtgctcatagtgccaatact
caaaaactagcagccatctgccgggaatcaggcgccaccacctatgcgattgaaactgct
gctgagattcaaaccgactggtttaaaggtgtagataaggtcggtataactgcaggtgct
tctacacctgactggatcatagaggaggttgtcaagaaaatgaccgatatacgtcagaac
gaacagacagaacaaaatccccaggatatggagcagctgctcaatgaggctctggaattc
caaagggttagccgggggcaaaagttaaaaggcactgtggtgtctgtaagtgacgatgaa
gtcctggtggatataggagccaaatcagaagctgtcgttcccttaagggaactgacctgt
tgtccggtggaatccgccagagaatatgtaaaacctggggatgaaattgaggtagtagta
ctaaaggttgaggatatggaagggcggatcgtctgttctaaacaaaaagctgatgccatg
aaggctatgaataccctggaagaagcctacaaaaccggacaaaaagtaaccggtcgggtg
gctgaagtaattaaaggcgggttactggtagatctgggagtaagagcatttttgccggcc
tctcatgttgatgttcgttatgtggaaaatctagaaaaatatgttggtcaggaagttgct
gtcaaaataattgaatttaaccggcagaaagccagagtagtggtcagccggaaagcagtg
attgaggaagaacagctgcagaagaagacgaatgcactggctactcttgctcctggacaa
atcgtgaaaggaaaggtacgccgtattacttcttttggagctttcgtagatctgggagga
atagatggtttactgcatatttctgaattagcctggcatcatgtagatcaccctgctgaa
gtgatcagagaaggggaagaaattgaggtaaaaatactggatatagatcaggccaatgaa
aagatatctttaagtcggcgtcaggttttacccagtccctgggaaacagtagagaaaaaa
tacaccgttggctccattgtaaaagggaaagtggtgcggttagttccttttggggccttt
gtagagttagaaccgggagtagatggtttgattcacctttctcagctggcggataggagg
gtggccaaagctgacgaagtggtacagccaggtcaggaagtcttagtaaaggttattgac
gtaaaatctgatgagaagcgtatcagtttatccttaaaagaggctcagggagttgttcct
gaggcataa
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