KEGG   Carboxydocella thermautotrophica: CFE_1293
Entry
CFE_1293          CDS       T05389                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
cthm  Carboxydocella thermautotrophica
Pathway
cthm02024  Quorum sensing
cthm03060  Protein export
cthm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cthm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    CFE_1293
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CFE_1293
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CFE_1293
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cthm02044]
    CFE_1293
Enzymes [BR:cthm01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     CFE_1293
Secretion system [BR:cthm02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   CFE_1293
  Eukaryotic Sec-SRP protein
   CFE_1293
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 AAA_30 CbiA Zeta_toxin AAA_33 CLP1_P AAA_31 APS_kinase cobW ParA nSTAND3 AAA_17 AAA_16 MMR_HSR1 AAA_18 6PF2K Het-C MeaB AAA_24 ABC_tran Thymidylate_kin Not3 ArsA_ATPase RMI1_C
Other DBs
NCBI-ProteinID: AVX20482
UniProt: A0A2R4N060
LinkDB
Position
1283371..1284723
AA seq 450 aa
MAIFENLSERLQAAFKRLRGKGKVTEEDVSEVMREIRVALLEADVSYKVVKDFIKKVKER
AVGQEVLASLTPAQQVIKIVHEELIELLGGIQSRLTTAPKPPTVIMLVGLQGAGKTTSAG
KLANLLRKQGKKPLLVAADIYRPAAVKQLQVLGEQLQIPVFAMGTSVSAVNIAKGALEYA
ASHGRDMVIIDTAGRLHINEELMQELQDIKAAIKPHEILLVVDAMTGQTAVEVAETFNAQ
LGIDGVIMTKLDGDAKGGAALSVRAVTGKPIKFAGMGEKLDALEPFYPDRLASRILGMGD
VLSLIEKAQAAFDQAEAEKLQEKMRKAEFTLEDFLNQMQQMKKLGPLENILSMLPGIGGK
ELKELQKQINPKEMARVEAIILSMTPQERAKPEIIDSSRKKRIARGSGTRVQDVNKLLEQ
FKQAKAMMKQFAQLEKKMKKKGGIKLPFFK
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggctatttttgaaaatctcagtgaacgtttgcaggcagcatttaagcggctgcgcggt
aaaggcaaggttactgaagaagatgtttctgaagtgatgcgcgaaatccgggtggcactt
ttagaagcagacgtaagttataaagtagttaaagattttataaaaaaagtaaaggaacgc
gctgttggacaagaagttttagccagtttaacaccggctcagcaagtgattaaaatagtc
catgaagaactgatagaacttctaggtggtatacaaagccggttaactactgctcccaag
ccccctacagttatcatgctggttggtttacagggggcagggaaaaccacaagtgctggc
aagctggccaatttattgcgtaaacaaggcaaaaagcccctgctggttgctgctgatatt
tatcgacctgctgctgttaaacagttgcaggttttaggagagcaactacaaatacctgtg
ttcgctatggggacctcagttagcgcagtcaatatagcaaaaggggcccttgaatatgcg
gcatctcatggtcgagatatggtgataatcgatacggcgggaagattgcatattaacgag
gaattgatgcaggagcttcaggatatcaaagccgctatcaaaccccatgagatattgctg
gttgttgatgcgatgaccggtcagacagctgtagaagtggctgagacctttaatgcccag
ctgggtatcgatggtgttattatgaccaaattggatggtgatgccaaagggggagcagct
ctttcagttcgggctgttaccggtaaaccaataaaatttgctggcatgggcgaaaaactg
gatgctctggaacctttttacccggatcgactggcatcacggatcctgggtatgggagat
gtgctgtctctaatcgaaaaggcacaggctgcttttgaccaggcggaagcggaaaaactg
caggaaaagatgcgaaaagcagaattcaccctggaagatttcctgaaccagatgcagcag
atgaaaaaactggggccgctggagaatattctaagcatgctgcctggcattggaggtaaa
gagctgaaagaattacaaaagcagattaatcccaaagaaatggcgcgtgtagaagccatc
atcctatccatgacccctcaggaaagagcaaaaccggaaattattgactccagtcgtaag
aagcgtattgccagaggttcaggcactcgtgtacaagatgtaaataaacttttggagcaa
tttaaacaggcgaaagcgatgatgaaacaattcgctcagctggagaagaaaatgaagaaa
aaaggcggtattaaattgccgttctttaaatag

DBGET integrated database retrieval system