Carboxydocella thermautotrophica: CFE_1446
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Entry
CFE_1446 CDS
T05389
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
cthm
Carboxydocella thermautotrophica
Pathway
cthm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cthm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CFE_1446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthm03400
]
CFE_1446
DNA repair and recombination proteins [BR:
cthm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CFE_1446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
Rad17
AAA_27
Motif
Other DBs
NCBI-ProteinID:
AVX20635
UniProt:
A0A2R4N0J7
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Position
1425963..1428590
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AA seq
875 aa
AA seq
DB search
MNNNLTPMMKQYLEMKDKHKDCLLFFRLGDFYELFFEDAEIAARELEITLTGRDGGLEER
VPMCGVPYHSADSYIARLINKGYKVAICEQVEDPKQAKGIVRREVIRIITPGTIIDTTVL
DEKSNNFIMALHYEDNLIGLAASDVSTGLFQVTQFKCDPHKQKLIDELARLNPAEILISE
SLANFIGNPHPNWFDNQGKRIVTEYHSWAFAWDFTNRTLTKHFHVNDLKSLGLDHWNSAA
KAAAALLDYLLATQKNCLSHINKLELYNIDKIMYLDAITRRHLELTQNLRDGSREHTLLS
VLDNTVTALGGRTLKQWIENPLLNLQEINNRLTAIEQMVFDSRWRLKIKQLLANVYDLER
LAGKIVYKTVNPRDLVALGSTLKVLPEIKKLLEEKKAGQLRYIFDNLCLHESIAALIEAA
IMPEPPISSKDGNIIKPGFNAELDKLRTAATEGKTWLARLEAEEKEKTGIKSLKIGYNKV
FGYYLEVTKANLHLVPSHFIRKQTLSTGERYVTERLKELEEIILGAEEQGIELEYQIFCQ
IRETIAQEIPQLQKTAKLLGELDALLSLAVAAVQNNYVKPVLNLSNIIDIKKGRHPVVEK
SLNGQWFIPNDTYLDNQQNRLLIITGPNMGGKSTYMRQVALIVLMAQIGSFVPAEQAEIG
LVDRIFTRVGASDDLARGQSTFMVEMQEVANILHNATAKSLIIMDEIGRGTSTFDGLSIA
WAVAEYLNDPQKIGAKTLFATHYHELTKLAERHPEIKNYCVAVKEEGEDIVFLRQIVPGS
SDRSYGIHVAKLAGLPAETILRAKEILEQLENERKDISIRQEIPYSTPVQQLTLFNDSNP
ILDELLNLNLITTTPLDALNILFNLQKKAQEYLKR
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
ttgaataacaacttaaccccgatgatgaaacaatacctggagatgaaagataaacacaaa
gactgtttgttgttttttagattaggagatttttacgaactcttttttgaagatgctgaa
attgctgccagggaattagaaattaccttaaccggtcgggatggcggattggaagagcgg
gtgccaatgtgcggtgtgccctatcattccgctgattcctatatagcccggctgattaac
aaaggttacaaagttgccatctgtgagcaagtagaagatcctaaacaggccaaggggata
gtaagaagagaagtaattagaataatcactccggggacaattattgatacaactgtatta
gatgagaaaagcaataactttatcatggctttacattacgaagataatttaatcggcctg
gctgccagtgatgtctccaccggcctcttccaggtaacccagtttaagtgtgatcctcac
aaacaaaaattgatagatgaactagccagattgaatccagccgaaattttaatctcagag
tctctggctaattttatcggtaacccccacccaaactggttcgataatcagggtaagagg
attgtgaccgaatatcactcctgggcttttgcctgggactttaccaataggactttaacc
aagcactttcatgtcaatgatttgaaaagtttgggacttgaccactggaattcagccgcc
aaagctgctgctgcattgctggattaccttctggcaacgcaaaaaaattgcttgtcccat
attaacaaacttgaattatataatattgacaaaataatgtatttagatgcaataacccgg
aggcatctagaactaacacaaaatttaagggatggtagcagggaacataccttgctttca
gttctggataataccgttacagcccttggcggcagaaccttaaagcagtggattgaaaac
ccacttcttaatttgcaggaaataaataatcgacttactgccattgaacaaatggtattt
gatagtcgctggagacttaaaattaaacagcttttagcgaatgtctatgatctggaaaga
ttggcgggaaagatagtatataaaactgtaaaccccagagacctggtagccttaggttca
accttaaaagtgctgccagaaataaagaaacttctggaggagaaaaaagctggtcagctt
cgatacatttttgataatttgtgcttgcatgaaagcattgccgctttaatcgaggcagct
atcatgcctgagccacccatttccagtaaggatggcaatataattaaacctggctttaat
gcggaactggacaagttacggactgcagctactgaaggcaagacctggctggctcgtttg
gaagcggaggaaaaagaaaaaacaggaataaagagtttaaagattggttataacaaggtt
ttcggttattatcttgaagttaccaaagccaacttgcatctggtcccatcccatttcatt
cgcaaacaaactctttcaacaggagaaagatatgttacagaaagattgaaagagttagag
gaaattatactgggagcggaagagcaggggattgaactggaataccagatcttctgccaa
atccgcgagaccattgctcaggaaatcccccagctgcaaaaaacagcaaagctcctgggg
gaactggatgctctactcagtttggcagtagcagcagtacaaaataattatgtgaagcca
gtactcaatttaagtaatataatcgacatcaagaaaggccgacatcctgtagtagaaaaa
agtctcaacggccaatggtttatccccaatgatacttatttagacaatcagcaaaatcgc
ttgttaatcattaccgggcccaatatgggcggcaaatccacctatatgcgccaggtagca
ctgattgtactcatggcccagataggctcctttgtcccggcagaacaggctgaaatcgga
ctggtagatcggatttttaccagagtaggggcatctgacgatttggcccggggtcagtct
acatttatggtagaaatgcaagaagtggctaatatcctgcataatgccactgcaaaaagc
cttattatcatggacgaaattggtcggggcaccagcacttttgatggtttgtccattgcc
tgggctgttgccgagtacttgaatgatcctcaaaaaattggcgccaaaaccctttttgca
acccactatcatgagctgaccaaactggctgaaaggcatccggaaataaagaattattgt
gttgccgttaaggaagagggggaagacatagtatttttgcgccagattgtcccaggcagc
agtgaccgcagttatggtattcatgtagccaaactggctggtctaccggccgaaacaatc
ctgcgtgccaaagagattctggagcagctggaaaatgagcggaaagatattagcatcagg
caggaaataccctattcaacccccgtacagcagctgaccttatttaatgattccaatcct
attctggatgaattgttaaatttaaatcttattactacaacccccctggatgcattgaat
atcctgtttaacttgcagaaaaaggcccaggaatatctcaaacgatga
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