Carboxydocella thermautotrophica: CFE_1474
Help
Entry
CFE_1474 CDS
T05389
Name
(GenBank) SSU ribosomal protein S12P methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cthm
Carboxydocella thermautotrophica
Brite
KEGG Orthology (KO) [BR:
cthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cthm03009
]
CFE_1474
Enzymes [BR:
cthm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CFE_1474
Ribosome biogenesis [BR:
cthm03009
]
Prokaryotic type
ribosomal protein modification factors
CFE_1474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
YbjQ_3
Motif
Other DBs
NCBI-ProteinID:
AVX20663
UniProt:
A0A2R4N0Q3
LinkDB
All DBs
Position
complement(1456350..1457687)
Genome browser
AA seq
445 aa
AA seq
DB search
MVRVGLVSLGCAKNRVDSEVMLGHLFNKGYTITDNAEEADVLIINTCGFIQSAKEESIET
ILEMAQYKEKGKCQALVVTGCLSKKYHDELEKELPEVDGFLGTNEIDKIGDVVEQILAGK
KIAEVNKKDDYLYDSSKPRILTTPNFYAYVKVAEGCNNRCHYCTIPVIRGAFRSRKKEDI
LNEINLLGERGVKEILLIAQDTTSYGLDLYGKPELVDLLQEINNNNNINWIRVLYSYPIF
FSDELIKTIKNLPKVCHYLDIPLQHCSDKILTTMNRKGNKQFIKDLVYKLRTEIPDIVLR
TSFIVGLPGETEDDFNELLEFMQEMQFDRVGIFTYSREDGTVAYNMENQVPENLKKQRWE
RAMQVQQEISYAKNQQRVGKTFLVLVEGTTSEGLYFGRSQYEAPEVDGKIFFSSNQSLAS
GNFVNIRITEAYEYDLLGEIVHESS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggttagagtaggacttgtatcattgggatgcgcaaaaaaccgggttgattcagaagta
atgttgggacatttgtttaataaaggatatactataaccgataatgccgaggaagctgat
gtgttgattataaacacctgtggctttattcagtctgcaaaagaggaatctatagaaact
attcttgaaatggcacaatataaagaaaagggtaaatgtcaggctcttgtggttactggg
tgtttgagtaagaaatatcatgatgaattagaaaaagaacttcctgaagtagatggtttt
ctgggtactaatgaaatcgataaaatcggtgatgtagttgaacagatactggctggtaaa
aaaatcgccgaagttaataaaaaagatgattacctttatgactcgtctaaaccacgtatc
ttaacaacccctaatttttatgcgtatgtaaaagtagcagagggttgtaataaccgctgc
cattattgtacaatcccggtaatcagaggagcgtttcgcagtcgtaagaaagaagatatt
ttaaatgaaattaatttattaggagaacggggagtaaaggaaatcctattaatagcgcaa
gatactaccagttatggtcttgacctgtatggtaagccagagttagttgatttattacaa
gaaatcaataataataacaatataaattggattagagtattatacagctatcctatattt
ttttccgatgaattaatcaaaaccattaagaatttgccgaaagtctgtcattaccttgat
attcctttacaacattgtagtgataaaattttaaccactatgaaccgaaaaggtaataaa
cagttcataaaagatttagtttataagctgcggactgagataccagatatagttttgcgt
accagttttatagtaggtttgcctggcgaaaccgaagatgactttaatgagttattggag
ttcatgcaagaaatgcaatttgaccgggttggaatttttacttattcccgggaagacgga
accgttgcttacaatatggagaaccaagtgcctgaaaaccttaaaaaacaacgttgggaa
agagctatgcaggtacaacaagaaatatcctatgccaaaaaccagcaacgagtagggaaa
acctttttagttttagttgaagggacaacttctgaaggattatattttggtcggagccag
tatgaggctcccgaagtggatggcaaaatctttttctcatcaaatcagagtttagcctca
ggtaattttgttaatataaggattactgaagcttacgagtatgatttgttaggggagatt
gtgcatgaatctagctaa
DBGET
integrated database retrieval system
