Carboxydocella thermautotrophica: CFE_1545
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Entry
CFE_1545 CDS
T05389
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
cthm
Carboxydocella thermautotrophica
Brite
KEGG Orthology (KO) [BR:
cthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthm03021
]
CFE_1545
03009 Ribosome biogenesis [BR:
cthm03009
]
CFE_1545
Transcription machinery [BR:
cthm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CFE_1545
Ribosome biogenesis [BR:
cthm03009
]
Prokaryotic type
rRNA transcription factors
CFE_1545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_2
KH_NusA_C
MRP-S35
KH_1
DnaB_2
Motif
Other DBs
NCBI-ProteinID:
AVX20723
UniProt:
A0A2R4N0W9
LinkDB
All DBs
Position
complement(1514133..1515176)
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AA seq
347 aa
AA seq
DB search
MSGELLEALVDLMREKGLDKEVIIEALEAALVSAYKKNFGTGDNVRVDINRDTLELKVFA
RKTVVEEVADQTQEISLTEARKINPRYDLGDVVELEVTPRNFGRIAAQNAKQVVIQKLRE
AERGLIYEEFANREGDIVTGIVQRIERDNVIIDLGKTEALLSKSEQMPTEEYHSGDRIKT
YVVEVKRTNKGPQVYVSRTHPGLMKRLFELEVPEIREGIVEIKAVAREAGYRSKIAVHSR
DENVDPVGACVGQKGARVQMVVNELKGEKIDIIPWHPDPAVFVAAALSPAKVVKVEIRDM
EKMARVIVPDYQLSLAIGKEGQNARLAAKLTGWKIDIKSESQAAELE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtgaactactggaagcactggttgatttgatgcgggaaaagggactggacaag
gaagtaattatcgaagcactggaagcagctctggtttcagcctacaaaaagaactttggt
accggagacaatgtcagggtggatattaaccgggatacgctggaacttaaagtctttgcc
agaaaaactgtagtagaagaagtggctgaccaaacccaggaaatcagcctgaccgaggcc
agaaaaattaacccccgctatgacctgggcgatgtggtggaactggaagtaactccccgt
aactttggtcggattgcggcccagaatgccaagcaggtggtaatccagaagctgcgggaa
gctgaaagaggtctgatttatgaggaatttgccaatcgggaaggggacattgttaccggg
attgtacagcgcatcgaacgggataatgttatcatcgatctgggcaaaaccgaagccttg
ctctccaaaagtgagcaaatgcctacggaagaataccattccggggacaggattaaaacc
tatgtggttgaggtcaagcgtaccaataaaggccctcaggtctatgtttcccgtacccat
ccggggctgatgaaacgcctgtttgagctggaggtacctgaaattcgggaaggaattgtg
gaaatcaaggcggtggcccgggaagcaggataccgttccaagattgccgtccattccaga
gatgaaaatgttgatccggtgggagcatgtgtcggtcaaaaaggggcccgggtgcagatg
gtggtaaatgaattgaagggcgaaaaaattgatattatcccctggcatccagacccggca
gtgtttgtggctgctgccctgagccctgccaaagtggttaaagtagaaataagggatatg
gagaaaatggccagagtaattgtgccggattaccagctttctctggctattggtaaagaa
ggacaaaatgcgcgtttagcagcgaaattaacaggctggaaaatcgatatcaagagtgag
agtcaagctgccgaactggagtga
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