Carboxydocella thermautotrophica: CFE_1759
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Entry
CFE_1759 CDS
T05389
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cthm
Carboxydocella thermautotrophica
Pathway
cthm03410
Base excision repair
cthm03430
Mismatch repair
cthm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cthm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFE_1759
03430 Mismatch repair
CFE_1759
03440 Homologous recombination
CFE_1759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthm03400
]
CFE_1759
DNA repair and recombination proteins [BR:
cthm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CFE_1759
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CFE_1759
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CFE_1759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
GLUCM-like_C
Motif
Other DBs
NCBI-ProteinID:
AVX20930
UniProt:
A0A2R4N1J0
LinkDB
All DBs
Position
complement(1747115..1749361)
Genome browser
AA seq
748 aa
AA seq
DB search
MREVRFQLRNLRPMPVELQELAGSKPYLAQLLWQRGWTELPPEAELSSPLDLPQLETGAS
LVWQAIEMGQPILVYGDYDVDGVTATAVLYRALQALGAKVEYHVPDRFEEGYGLNKERLE
QAAAAGIQLVLTCDCGVSNEEEVRRARELGLKVVITDHHLPPERLPAAEAVINPHLLDQP
AHPAAWLSGVGVAYYLVRQLYQLAGRAGQERELEQLVALGLVADVVPLLGDNRTLVKRGL
QLLQSDQVYPGLGLLLARYRQEEIDEELIAFQLAPRLNAAGRLDHARLAVELLIGRDETR
LDEIARRLELLNRQRKAIGDEMGQEAEELLRLRGWQPGEPILLWQPHWHHGVLGIVAGRL
CEKYRVPVLLAGLKEDGETLTGSARAPAGYHCREALQQAEVHLQKYGGHAEAAGFSLPRL
NWEAFTTTLKSVLVQQQQNLPTTTTLLYDLPFNLTELSPELAREWQELKPFGPGNPPPVF
LLEGVEIVSTQVLAQRHLKLTIRQQGIGQTLNWWLAAERAEQIVPGTRGDLLVQPVWQRE
STQLICLDFLARTLPGPQPALNLVIEDWRNWREEGRQLPLWQESWYYQWGEGYTPPVRAE
TLVLLKPPPSERQLREMLALTGARRLVLAFGRADLGRADDFLQNLLALLKHNLALLPPFL
GRINLEEAAARLGETVETVFLGLQVLQARHFLQILEVEEEELILQKGPGKGPGDRKLEAG
LLAALQESTAFRRFLLEKEIDRIKLYLH
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
gtgagagaggtcagatttcagttgcgtaacctccggccgatgccggttgaactgcaggaa
ctggcaggcagcaaaccttatctggcccagctcctctggcagcggggctggactgaattg
ccgccagaagcggagttgagctctccgctggatttaccccagctggaaaccggcgccagc
ctggtctggcaggccatcgaaatggggcaacctatcctggtctatggggactatgatgtg
gatggagtcactgctaccgctgttctgtaccgggccctgcaagctctgggggcaaaggtg
gagtaccacgtacctgaccggtttgaggaaggatatggattaaataaggagcggctggaa
caggcagcggctgccgggatccagctggtgctcacctgtgactgcggagtgagcaatgaa
gaagaagtacggcgagccagagagctagggctcaaggtggtgattactgatcaccacctg
ccaccggaacggctgccggcggcagaggcggtgatcaatcctcacctgctggatcaaccc
gcccatccggctgcctggctttccggtgtcggtgtagcctattatctggtgcgtcagctc
tatcagctggccgggagagcgggtcaggaaagagaactggaacagctggtagccctgggg
ttggtcgctgatgtggtacctttgctgggggataaccgtacactggtgaaacggggttta
cagctgttgcaatccgatcaggtttatcccggtttgggcctgctgctggcccgttaccgg
caggaggagattgatgaagagctgatagcttttcaactggcacccaggctcaatgccgcc
gggcggttggaccatgctcgcctggcggtagaattgttgattggccgtgatgaaaccagg
ttagatgaaattgcccgcaggctggaattgctgaaccggcaacgcaaagccatcggggat
gaaatggggcaggaagcggaagaattattgcgcctgaggggctggcaaccgggtgaaccc
attctgctctggcagccgcactggcatcatggcgtactgggaatagtggccgggcgcctc
tgcgaaaaatatcgggtgccggtattgctggcaggattgaaggaagatggggaaaccctg
accggttctgcccgggcaccggcaggttaccattgccgggaggctttgcaacaggctgaa
gttcatttgcagaaatatggcggtcatgcggaagcagccggattttccctgcctcgcctg
aactgggaagcttttaccaccactctcaaatcggttttggtgcaacagcagcaaaatctg
ccgaccactacaaccctgctgtatgatctacctttcaatctgaccgagttaagcccggaa
ctggcccgggaatggcaggaattgaagccttttggaccaggcaatccccctcctgtattt
ttactggaaggggtggagatagtttcgacccaggtcctggctcaacgccatttgaagctt
accatcagacagcagggaataggacaaacgttgaactggtggctggcggcggaacgggca
gaacaaattgtgccgggaacccggggggatttgctggtgcagccagtctggcagagggaa
agtacgcagctgatttgcctggattttctggctcgcaccctgccgggaccacagccagcc
ctcaatctggttattgaggactggcgcaactggagggaggaagggcggcaactgccgctc
tggcaggagagctggtattatcagtggggtgaagggtatactccgccagtcagggcagaa
accctggttttgttgaaaccaccgccatcggaacgccagctgcgggaaatgctggccttg
accggggcccggcggctggtactggcttttggcagagcagatttgggcagggctgatgat
ttcctccagaatttgctggcactcttgaaacataacctggcccttttgcctccctttctg
gggcggattaacctggaagaggcggcagccaggctgggggaaacggtggaaactgttttt
cttggtctgcaggtattacaggcccgtcattttctgcaaatattagaagtagaagaggaa
gagctgattctgcaaaaaggacccgggaaagggccgggagaccgtaaactggaagcgggt
ttgctggcagctttacaggaaagtacagcctttcgccgatttcttttagaaaaagagata
gatagaataaaactttatttacattaa
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integrated database retrieval system
