Carboxydocella thermautotrophica: CFE_1871
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Entry
CFE_1871 CDS
T05389
Name
(GenBank) stage V sporulation protein D (sporulation-specific penicillin-binding protein)
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
cthm
Carboxydocella thermautotrophica
Pathway
cthm00550
Peptidoglycan biosynthesis
cthm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cthm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CFE_1871
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cthm01011
]
CFE_1871
Peptidoglycan biosynthesis and degradation proteins [BR:
cthm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CFE_1871
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
NfeD
Motif
Other DBs
NCBI-ProteinID:
AVX21041
UniProt:
A0A2R4N222
LinkDB
All DBs
Position
complement(1855181..1857403)
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AA seq
740 aa
AA seq
DB search
MVYATGIIMRRRISILMAGIGLILILLLLRLAWLQFIRGDELTNKALENRLREVQLEPKR
GVIYDRNGKELAISVSADSVGATPSQIKDPVAVAEELAPILEMDKEKLIKLLSKKASFVW
IANKIDSQKARKIREKNLPGISLYEEPLRYYPNGSFAAHLLGFVQFRGNIGGGGIEAALE
KELRGIPGKIVVEYDAAGRPIPQATHRYYPSVEGNSVVLTIDETIQHFVERELDKVMEKH
KPAHAAIIVMDVKTGEILAMGVRPTYDPNQYFKFPHELWSKNFAVADAYEPGSTFKVITA
AAALEEGVVRPQDRFYDPGFKEVLGKKIKCWKAGGHGSQSFVEVAQNSCNPGFIEVALRL
GVEKFSRYVRAFGFGMPTGISLPGEGEGILVNPKKATQLDLATMAIGQSNAVTPIQLITA
VAAVANDGMLMKPQVVKEIRDIKGNVVRTFAPQPVRQVISTTTARELRGILEHVVARGTG
QKAYLEGYRAAGKTGTAQKAGPGGGYVAGKYVASFVGFAPADNPRVAALVVIDEPQGGEY
YGGVIAAPVFGAVMGDTLKYLGVMPQLDAGVKPDPKLIPRQSRPEQPGEKLKAVEVPSLV
NLPVAEARQLAEKAGLKVLVEGEQGVVQRQFPLAGAVVTQGTEILLSTRRGEVPAGTRVT
VPDVSGKTLRDAATLLALTGLRLEAEGSGVAYEQSIAPGEKVVAGTVVRVKFRPPAEGGS
GGNNPTQPTAGTLPDSELKD
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
gtggtgtatgccaccggtattatcatgcggaggcggatttccatcttaatggccggtatc
ggccttattttgattttgctgctgttgcggctggcctggttgcagttcatccgcggcgat
gaactgactaataaggcgctggaaaacaggttgcgggaagtgcagctggaacccaagcgc
ggtgtaatctatgaccgtaatggtaaagagctggccatcagtgtcagtgccgattcggtt
ggagcgactccaagccagattaaagatccggtggcggtggcagaggaactagctcccatt
ctggaaatggacaaagaaaaactgattaaattattaagcaagaaggccagttttgtctgg
atagccaacaagatcgacagccagaaagccaggaaaatccgggaaaaaaacctgcccggg
atttccctgtatgaggaaccgttgcgttattaccccaatggcagttttgctgctcatttg
ctggggtttgttcagtttcgcggcaatatcggcggtggcgggatagaggcggccctggag
aaagagttacggggaataccgggaaaaattgtggtggaatatgatgcagcaggtcggccc
attccccaggctacccaccgttattatccctcggtagaaggcaacagtgtggtgctgacc
attgatgagactatccagcatttcgtggaacgggaactggataaggtgatggaaaagcac
aaacccgctcatgctgccataatagtaatggatgtcaaaaccggggaaatcctggccatg
ggggtgcggccaacctatgaccctaaccagtatttcaagttcccccatgaactgtggtcc
aagaattttgccgtagcagatgcctacgagcctggttctactttcaaggtcatcactgcc
gcagctgctctggaggaaggggtagtgcggccccaggaccgtttttatgatcccggtttt
aaagaagtgctgggaaaaaagattaaatgctggaaagccggaggccacggcagccagagc
tttgtggaagtggcccagaattcctgtaacccgggttttattgaggtggctttgcggctg
ggagtggaaaaattcagtcgctacgtgcgggctttcggttttggcatgcccaccggcatt
tccctgccgggggaaggagaagggattctggtcaatccgaaaaaagcgacccagcttgat
ctggctaccatggccatcggccagtccaatgctgttacacccattcagctgattaccgca
gtggctgcggtggccaatgatgggatgctgatgaaaccccaggttgttaaggaaatccgg
gatataaaaggcaatgtggtcaggacctttgcaccccagccggtgcggcaggtgatttcc
accactacggcccgggaactgcgagggatcctggaacacgtggtggcccgtggtaccggg
caaaaagcctatctggaaggctaccgggcggccggaaaaacgggtacagcccagaaagcc
gggcctggagggggatatgtggctggcaagtatgtggcttcctttgtcggttttgccccg
gcggataacccccgggtagcagctctggtggtgatcgatgaaccccagggcggagaatat
tatggtggggtcatcgctgctcctgtattcggggcggtgatgggtgacactctgaagtat
ctgggggtaatgccccagctggatgccggggttaaacctgatcccaaactgataccccgg
caatcccggccggaacagccaggcgaaaagctcaaggcagtggaagtgccttccctggtc
aacctgccggtagcggaggccaggcagctggcggaaaaggccggactcaaggtgctggtg
gaaggggaacagggcgtggtacagcgccagttccctctggcaggagctgtggtcacccag
ggcacggaaatccttctctccacccggcggggtgaagtgcctgcgggtaccagggtgaca
gtaccggatgttagtggcaaaaccctgcgggatgccgctaccttgctggctttgaccgga
ttgaggctggaggcggaaggcagcggggtggcctatgagcaaagcatagctcccggggaa
aaggtggtggctggaacggtggtcagggtgaaattccgccctccggcagaaggaggaagt
ggagggaacaatccgacccagccaacggccggaaccttgcctgattctgaactcaaggat
taa
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