| Entry |
|
|---|
| Name |
(GenBank) DNA mismatch repair protein, MutS family
|
|---|
| KO |
| K07456 | DNA mismatch repair protein MutS2 |
|
|---|
| Organism |
cthm Carboxydocella thermautotrophica
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:cthm00001]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CFE_2030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:cthm03400]
CFE_2030
DNA repair and recombination proteins [BR:cthm03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CFE_2030
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
complement(2010845..2013208)
|
|---|
| AA seq |
787 aa
MNNRALEKLEYSKIIAQLADCTMSNLGRELAENLLPTTEEAEIRRRQQETQEARELLRVY
PDLPWSGLKDPRQAVGRAKRGAVLAPEELLAVADSMRASRRLKRFFAELKEHYPLLQEYA
ANLASFKPVEDAIYRAILPGGEVADEASPRLAALRRQIRSHSVRVKEKLEQIIRSPEWQK
MLQDPIVTQRGDRYVVPVKNEYRGQFPGLIHDQSGSGATLFIEPMAVVEINNDLKRLKAE
EEEEIERILQELTARVVAEIDQLELAVEALAHLDFALAKGTLSQRWDGVGPKLNRDGYIY
IKGGRHPLIKGRVVPVTIWLGRDFTTLIITGPNTGGKTVTLKTVGLFVILAQAGLHLPAE
LGTEIGLYQQIFCDIGDEQSIEQSLSTFSSHMTNIISILAEADRDSLVLLDELGAGTDPA
EGAALAQAILEELHRRGAKTIATTHYSQLKTFAFSQPGIENASVEFDVNTLQPTYRLLIG
QPGSSNALQIAARLGLAPELVERARSFMSKAETEMADLIQSLEASQRAAEAERQEAERLR
RESERLRQEYAQLKEKLEAQRERILARAREEAWAEVKKARQEAENIVAELKARLAEAPSA
QTLQAAYDARSRLRKLQADKAVTPTTPSVATGGRPPRELEVGDRVKVLSLNQEGTVVGGI
KPGVSAVVQVGALKMTVRWEDLRLRAGSDPEAGQVQGAGSLMSAKTAAIKRELDLRGMTV
DEALYELEKYLDNALVAGLNQVYVIHGKGTGALRKAITQALKEHPRVKNYRHGAANEGGI
GVTVVEL |
|---|
| NT seq |
2364 nt +upstreamnt +downstreamnt
atgaacaatcgcgctctggaaaaactggaatacagcaaaatcatcgcccagttggccgat
tgcaccatgagcaacctgggccgggagctggcggaaaacctgttacccactaccgaggag
gcggaaattcgccgccgccagcaggagactcaggaagcccgggaattgttgcgcgtgtat
cccgatctgccctggtccggtttaaaagacccgcgtcaggctgtgggccgggccaaacgg
ggcgcggtgctggctccggaggaactgctggctgttgcagacagcatgcgggccagccgc
cgcttgaagcgcttttttgcagaactgaaggaacattatccgctgctccaggaatatgcc
gctaacctggccagctttaaaccggtcgaggatgccatttaccgcgcgattttaccgggc
ggggaagtggctgatgaagcttctccccggctggctgccctgcggcggcagattcgcagc
catagtgtccgggtgaaggaaaaactggaacagattatccgttccccggaatggcagaaa
atgctgcaggaccccattgtcacccagcggggggaccgctatgtggtgccggtgaaaaat
gaatatcgcggccagttccccggtctgatccatgaccagtcaggcagcggggcgaccctg
tttattgaacccatggccgtggtggaaatcaataatgatctgaaaaggctgaaggcggaa
gaggaagaggaaattgaacgcattctgcaggaactgacggcccgggtggtggcggaaatt
gaccagctggaactggcggtggaggccctggcccatctggattttgccctggccaaaggg
actttgagccagcgctgggatggcgtagggccaaaactgaaccgggatggctatatttac
attaaaggcgggcgccatcctttaatcaaaggccgggtagtgccggttaccatctggctg
ggccgggatttcaccaccctgattatcaccgggcccaataccggcggtaaaactgtgact
ctaaagacagtaggcctgtttgtgattctggctcaggcgggcttgcatctgcccgctgag
ctgggaacggaaattggcctctatcagcagattttttgcgatatcggggatgagcaaagc
atcgaacaatccctctccacattttcttcccatatgaccaatatcatctccattctggcc
gaggctgaccgggatagtttggttttgctggatgagctgggggcaggtaccgatccagcg
gaaggagcggctctggcccaggccattctggaagagctgcatcggcggggagccaaaacc
atcgctactacccactacagccagctcaaaacctttgccttcagccagccagggattgaa
aatgccagtgtggagtttgatgtcaataccctgcagcctacttaccgtttgctcatcggt
cagccggggagttccaatgccctgcaaattgccgcccggctggggctggctccggagctg
gtggaacgggcccgttcctttatgagcaaggcggaaacggaaatggccgatctgatccag
agcctggaggccagccagcgggcagcagaagcggaacgccaggaagccgagcggttgcgc
cgggaaagcgagcgcctgcggcaggagtatgcgcagctcaaggaaaaactggaggctcag
cgggaacggattctggccagagcccgggaagaggcctgggcggaggtgaaaaaggcccgc
caggaggcggaaaatatcgtggcagagttgaaggcccgactggcagaggcgccttcggcc
cagaccttgcaagcagcctatgatgcccgttcccgtttacgcaaattgcaagcggacaag
gctgtcaccccgacaaccccgtctgttgctaccggaggcagaccaccgcgggagctggaa
gtgggggaccgggtcaaggtcttgagtttaaaccaggaaggcactgtggtcggtgggata
aaacccggtgttagtgccgtagttcaggtaggagccctgaaaatgacggtacgctgggag
gatctgcgcttgcgggccggttctgatccggaagcggggcaagtgcagggggcaggcagc
ctcatgtcggccaaaaccgctgctatcaagcgggaactggatttaaggggcatgacggtc
gatgaggctctttatgaactggaaaaatatctggataacgccctggtggccggactgaac
caggtctatgtcatccatggcaaagggacaggggctttgcgcaaagccatcacccaggcg
ttaaaagaacatccacgggtaaaaaattaccgtcacggtgcagccaatgagggcggcatc
ggcgtgacggtagtcgagttataa |
|---|
