KEGG   Carboxydocella thermautotrophica: CFE_2081
Entry
CFE_2081          CDS       T05389                                 
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
cthm  Carboxydocella thermautotrophica
Pathway
cthm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cthm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CFE_2081
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cthm03400]
    CFE_2081
DNA repair and recombination proteins [BR:cthm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CFE_2081
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CFE_2081
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 nSTAND_NTPase5 AAA_22 Kinesin AAA_16 FlaG UB2H AAA_5 UvrD-helicase HEM4 Orbi_NS3
Other DBs
NCBI-ProteinID: AVX21246
UniProt: A0A2R4N2B1
LinkDB
Position
complement(2061992..2063977)
AA seq 661 aa
MEFKLKSEFTPKGDQPEAIARLVEGLNKGYRYQTLLGATGTGKTYTMAQVIARVQRPTLV
IAHNKTLAAQLASEFKEFFPDNAVEYFVSYYDYYQPEAYIPQTDTYIEKDASINDEIDKL
RHSATAALFERRDVIIVASVSCIYGLGSPQEYRESMFSLRPGQIWDREQILRRLVDMQYN
RNDLNFTRGTFRVRGDVVEVFPVASSERAIRLELFGDELERIVEFDPLTGEIFGERRHVV
FFPASHYVTGRETLERALASIEAELKERLEELRAQNKLLEAQRLEQRTRHDLEMLREMGF
CQGIENYSRHLTGRAPGEPPYTLLDYFPDDFLIMVDESHVTIPQIGAMYEGDRSRKQALV
DHGFRLPSAFDNRPLKFSEFEQKINQIIFVSATPGPYELEKSAQIVEQIIRPTGLLDPEI
HVRPTKGQIDDLVGEIRQRVERDERVLVTTLTKKMAEDLTDYLRELGIKVRYLHSDIKTL
ERMLILRDLRLGVFDVLVGINLLREGLDLPEVSLVAILDADKEGYLRSERSLIQTIGRAA
RNANGQAIMYADRITDSMARAIQETNRRRSKQMAYNQAHGIVPQTVRKAVRDVIEATQAV
AEAAAKYGESTGKKKKLNKREVDKLLRQLEKEMKEAARRLEFERAAELRDAILELRAEYL
S
NT seq 1986 nt   +upstreamnt  +downstreamnt
atggagtttaagctaaaatccgagtttacccccaaaggggaccagccggaggctatagcc
cggctggtagaggggttaaataaaggttatcgctatcagaccctgctgggtgctaccggc
accggcaaaacctataccatggcccaggtaatcgcccgggtacagcggccgaccctggtg
attgctcacaataaaaccctggcagcccagctggccagtgagttcaaggaatttttcccg
gacaatgcggtcgagtattttgtcagctattatgattattatcagccagaggcctatatt
cctcagactgatacttatatcgaaaaagatgcctctatcaatgatgaaatcgacaaattg
cgccattcggccacggcagccctgtttgagcggcgggatgtcattattgtggccagtgtt
tcctgtatctacggcctgggttccccccaggaataccgggaaagcatgttttccctgcgg
ccggggcagatctgggacagggagcagattttacgccgcctggtggacatgcagtataat
cgcaatgacctcaattttacccggggtacattccgggtgcggggagatgtagtcgaagtt
ttcccggtcgcctccagtgagcgggccattcggctggaactgttcggggatgaactggag
cgcatagtggagttcgaccccctgaccggagaaattttcggggagcgccggcatgtggtg
ttttttccggcctctcactatgtgaccggtcgtgagacattggagcgggccctggcttcc
attgaagcagagctgaaagaaaggctggaagaactgcgggctcagaataaactgctggaa
gcccagcggctggagcagcggacccggcatgacctggagatgctgagggaaatgggcttt
tgccaggggattgaaaactattcccggcatttaacagggcgggcgccgggggaaccgcct
tataccttgctggactatttcccggatgactttttgattatggtggacgaatcccatgtc
actattccccagatcggagccatgtatgaaggggatcgctcccgcaaacaggccctggtg
gatcacggtttccgtttgccctctgcctttgataaccgacccttgaagtttagcgagttt
gagcagaaaatcaatcagattattttcgtttccgctacccccggtccctacgaactggaa
aagagtgcgcaaatagtggaacagatcatccgtcccaccggcttgctggatccggaaatt
catgttcgtcccactaaagggcagatcgatgacctggtaggggaaatccggcaacgagtg
gaacgggatgagcgggtgctggtcactaccctgaccaagaaaatggcggaggacctgact
gattacttgcgggaactgggcatcaaagtccgttacctgcattcggatattaaaaccctg
gagcgcatgttgattttgcgcgacctgcgcctgggggtcttcgatgtcctggttggcatt
aacttactcagagaaggcctggatttgccggaggtaagcctggtcgccattctggatgct
gacaaggaaggttatctccgttctgaacggtccttgattcagaccatcggccgggcggct
cgcaatgccaatggtcaggcgatcatgtatgctgaccgcatcaccgattccatggccaga
gccatccaggagaccaaccgccgccgcagtaaacagatggcttacaaccaggcccatggc
atcgtgccccagacggtgcgcaaggcggtccgggatgtaattgaggccacccaggcggta
gctgaagcagcggctaaatatggtgaatccactggcaagaagaaaaagctgaacaaaaga
gaggtagacaaactgctgcggcaactggagaaagaaatgaaagaggctgcccggcgcctg
gaatttgagcgggcagcggaattgcgggatgctatcctggaattgcgcgcagaatacctg
agctaa

DBGET integrated database retrieval system