Carboxydocella thermautotrophica: CFE_2166
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Entry
CFE_2166 CDS
T05389
Name
(GenBank) Superfamily II DNA or RNA helicase, SNF2 family
Organism
cthm
Carboxydocella thermautotrophica
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
SWIM
HDA2-3
SWI2_SNF2
ResT-TelK_cat
DUF61
DUF3944
Motif
Other DBs
NCBI-ProteinID:
AVX21329
UniProt:
A0A2R4N2V4
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Position
2143089..2146313
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AA seq
1074 aa
AA seq
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MNVPEISEKQIKQAASSPKVYERGLEYFADGLVKHIEYDHDRDEFRAIVSNRNLYNIRLR
FYPSGTWHYYCTCPAHDQLPGICKHVVAVLKALQTGYAFDPQAMQNRRARQLGAKLLSHL
AVTPTSPIKQELNLEVELTLQPMDHVIFAYLGLKIGLSRLYVIRDLNQFVSSLQTGQPLE
FGQKFTFEPTKQSFAACDQPVIDFLQEMYEQYAAVDRYETTSHFKQRPLPLSDYHLAQLL
HSLKEKSFVLCLPGNHSKLTRIKQGLSLGFNLAAANDELVLSLVENDLPPRPLTRDGSFF
FYQEEIWQVEDDQQRRYFLPLAQVLNQEKRLIFASEHKDRFATELLPALEKISKLEIAPE
LASRFIRQPLAARIYFDRYGEQGISARVEFEYGTITINPFSNQIPARDILLVRNQEKENA
ILSLLELADFTVNQGQIYLDEEEKVLEFITAYLPRLQELAEIFYSEEFKKLRVRPTLDFS
GRVRLNEEDNLLEVSFTFPDLPEEELREILASLQEKKKYHRLKDGSFLLLQQQELQQLAR
LLENLNLDASALQEATIQLPKYRAMYLDSFLRQHNLPNLRRDRAFKQLVQSILEPQDNDY
EVPASLQKVMRDYQKTGFRWLKTLAAHGLGGILADDMGLGKTLQVLAFLLSEQDTSPGPS
LVIAPTSLVYNWEAEARKFAPELKVLVVSGSPKDRQALLENLNQWDLVITSYGLIRRDIE
LYARQQFVYCFLDEAQHIKNAQTVNAKSVLQINARSYFALTGTPIENSLAELWSIFNFIL
PGYFPHYQEFRRKYELPIARGNPEVLAELSRLVKPFILRRVKKDVLKELPAKIETEIKAP
LTAEQQKVYLAYLKKARGEIAQELAAAGFEKSRMKILAALTRLRQICCHPALFLNNYRGD
SGKFQLFQEVLTDALASGHRVLVFSQFTSMLDILHQYLLGEGIEHFYLHGSVKPEERLSM
AHSFNQGQGKVFLISLKAGGTGLNLTGADMVIHYDPWWNPAVEEQATDRAYRIGQNKAVQ
VIKLISQGTIEEKVFALQQRKKELIASVIQPGETFLSKLTEAELRELFDLTTTG
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgccagaaatcagtgaaaaacaaatcaaacaagccgcctccagccccaaagtc
tacgaacggggcctggaatattttgcggacggtctggttaagcacattgaatatgaccat
gacagggacgaatttcgggccatagtcagcaatcgcaatctttacaatattcgtctccgc
ttttacccttcaggtacctggcattattactgcacctgtcccgcccatgaccagttgcca
ggaatctgcaaacatgtagttgcggtactgaaggcattacaaaccggttatgcctttgac
cctcaggctatgcaaaaccggagagcccgtcagctgggggctaaactgctcagtcattta
gccgttacccctacttctcccattaagcaggaactaaatctggaagttgaattgaccctg
caaccaatggatcatgttatttttgcttacctgggcctgaaaatcggtctgtcccgcctc
tatgtcataagggacctgaatcagtttgtcagttctcttcaaacaggacaaccgctggaa
tttggccagaaatttacatttgaaccgaccaaacaatcctttgccgcctgtgaccagccg
gtaattgactttttgcaggaaatgtacgaacaatatgccgctgttgaccgatatgagacc
acttcccatttcaaacaacgtcccttgcccctgagcgattaccatctggcccagctgcta
cacagtttgaaggaaaaatcttttgttttatgtttacctggcaatcacagcaaactaacc
cggattaaacagggtttatcccttggctttaatttagctgccgcaaatgacgaactggta
ttatccctggtggaaaacgaccttcccccccgccccctgacccgggatggcagctttttc
ttctatcaggaggaaatctggcaggtcgaagacgatcagcaaagaagatactttttacct
ctagctcaggtgttaaatcaggaaaagcgattgatttttgcttcagaacacaaagaccgg
ttcgctaccgagctcctgcccgctctggaaaaaataagcaagctggagatcgcaccagaa
ctggccagccgttttatccgccagcccctggcagcccgcatctatttcgaccgctacggg
gaacagggaatcagcgcccgggtagagtttgaatatggtactattactatcaatcccttc
agcaaccagattccggccagagatattttgctggtgcggaaccaggaaaaggaaaatgcc
attctctccctgctggaactggccgatttcaccgtcaaccagggtcaaatttacctggat
gaggaagaaaaggtactggagtttattactgcttatctgccccggctgcaggaactggct
gaaatcttctattccgaggaatttaaaaaactgcgggtacgcccgaccctggatttttcc
gggcgggtgcgtttgaatgaggaagataatctgctggaagtcagttttactttccccgac
ctgcccgaagaggaattgcgggagatcctggcttccctgcaggaaaagaaaaaataccac
cggctcaaggatggctctttcctgctcctgcagcaacaggaactccagcaactggcccgg
ctgctggaaaacctgaatctcgatgccagcgccctgcaggaagccaccatccagctgccc
aaataccgggccatgtatctggacagttttctgcgccagcacaatctgcccaatcttcgc
cgcgaccgggcttttaaacagctggtgcagtccatcctggagccccaggacaatgattat
gaagtgcctgcttctttgcaaaaggtgatgcgagactaccagaaaaccggtttccgctgg
ctgaaaaccctggccgcccacggcctgggcggcatcctggccgatgacatggggctgggg
aaaaccctgcaggtcctggctttcttgctttcagaacaggacacttctccaggaccatcc
ctggtcatcgctcctacctccctggtctataactgggaagccgaagctcgcaagttcgcc
cctgaactgaaagttctggtggtctcggggtccccaaaagaccggcaggccctgctggaa
aacctgaaccagtgggatcttgtcatcacttcctatggcttgatccggcgggatattgaa
ctttatgcccggcagcaatttgtttactgttttctggacgaggcccagcacatcaaaaat
gctcagaccgttaatgccaaatcggtcctgcaaatcaatgccagaagctattttgcctta
accggtacacccatagaaaactccctggccgagctctggtccattttcaatttcattctc
ccgggctatttcccccattatcaggaatttcgccgcaaatatgaattgcccattgcccgg
ggcaatcccgaagttctggccgaactcagccgtctggtcaaacccttcatcctgcgccgg
gtgaaaaaggatgtgttgaaggagctgccggcaaaaatcgagacggaaatcaaggctcct
ctcaccgccgagcaacaaaaagtctatctggcctatttgaaaaaggcccggggtgaaatc
gcgcaggagctggctgccgccggttttgagaaaagccgaatgaaaatcctggccgccctc
acccggctcaggcagatttgctgccatcccgccctcttcctgaacaactatcggggggac
agcggcaaattccagctcttccaggaagtcctgactgatgctctggccagcggccatcgg
gtgctggttttttcccagtttacctcgatgctggacatattgcaccagtacctgttagga
gaaggtatcgagcatttttatcttcatggttctgtcaagccagaagaacgcctgagcatg
gcccactcctttaaccagggccagggcaaagtcttcctgatttccctgaaagccgggggt
accggtctcaatcttaccggtgccgatatggttattcactatgacccctggtggaatccc
gctgtcgaggaacaggccacggaccgggcctaccgtatcggtcaaaacaaggccgttcag
gtgattaagctgatcagccagggcactattgaagaaaaggtttttgctctacaacaacgc
aaaaaggaactgatcgcttccgtcatccagcccggtgaaactttcctctccaaattgaca
gaagcagagctaagggaattgtttgatctgaccaccactggttga
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