Carboxydocella thermautotrophica: CFE_2333
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Entry
CFE_2333 CDS
T05389
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cthm
Carboxydocella thermautotrophica
Pathway
cthm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cthm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CFE_2333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthm03400
]
CFE_2333
Enzymes [BR:
cthm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFE_2333
DNA repair and recombination proteins [BR:
cthm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CFE_2333
RecFOR pathway proteins
CFE_2333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
TIP49
DUF815
AAA_22
AAA_14
AAA_3
TniB
nSTAND3
TsaE
IstB_IS21
NB-ARC
AAA_25
Sigma54_activ_2
RNA_helicase
Resolvase
NTPase_1
Bac_DnaA
AAA_24
NACHT
AAA_18
Rad17
AAA_33
AAA_17
AAA_28
NPHP3_N
ATPase_2
ABC_tran
AAA_19
CagL
Parvo_NS1
PaRep2b
Motif
Other DBs
NCBI-ProteinID:
AVX21476
UniProt:
A0A2R4N2Y2
LinkDB
All DBs
Position
complement(2293990..2294979)
Genome browser
AA seq
329 aa
AA seq
DB search
MEERLLSPQMGEEAEWDLSLRPRRLKEYIGQTRVKEHLQIFIEAARARREALDHVLLYGP
PGLGKTTLATVIANEMGVNLRITSGPAIKRPGDLAALLTNLQARDILFIDEIHRLSRSVE
EVLYAAMEDFALDIVIGKGPSARSLRLDLPPFTLVGATTRAGALSAPLRDRFGVICRLDY
YEQDELTAIVVRAAGILQIPITIEGAREIAGRCRGTPRIANRLLKRVRDYAQVRAQGRIT
GEVAAQALDLLAVDELGLDQTDRRLLETIILKFGGGPVGLDTLAASTGEEATTIEDVYEP
FLLQLGFIQRTPRGRVATQLAYRHLGVEV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagactgctctcacctcaaatgggggaagaggctgaatgggatttaagtcta
aggccccgccgcctgaaggaatatatcggccaaaccagggtcaaggaacacttgcaaatt
ttcatcgaagcagccagagcccgaagggaagctctggaccatgtgttgctttatggccct
cccggcctgggtaaaaccaccctggctacggtgattgccaatgaaatgggagtgaatttg
cgcattacttccgggcctgccattaagcgtcctggagatctggcggctttgctcaccaat
ttgcaggcccgggatattctgtttatcgatgagattcatcgtctcagccgcagtgtggag
gaagtgctttatgccgccatggaggattttgctctggatattgttatcggcaagggtccc
agtgcccgttccctgcgcctggatttgccgccctttaccctggtaggagcgaccactcga
gccggggctttaagtgccccgttgcgggatcggttcggggtaatctgccgcctggattac
tatgaacaagacgaactgaccgccattgtggtgcgggcggccgggattttgcaaatcccc
attaccattgagggagcgcgggagattgctggccgttgccggggcaccccccgcattgcc
aaccgattgttgaaacgggtacgggactatgcccaggttagagctcaggggaggattacc
ggggaggtagcggcccaggccctggatttgctggcagtggatgagctgggcctggaccag
acagatcgccgcttgctggaaaccattattctcaaatttgggggcggtccggtagggctg
gacaccctggccgcttctaccggggaagaggccactactatcgaagatgtttatgaacct
ttcctgttacagctgggtttcatccagcgcacccccaggggtcgcgtggccacccagctg
gcctatcgccatttgggagtggaggtatag
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