Carboxydocella thermautotrophica: CFE_2406
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Entry
CFE_2406 CDS
T05389
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cthm
Carboxydocella thermautotrophica
Pathway
cthm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cthm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFE_2406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthm03400
]
CFE_2406
Enzymes [BR:
cthm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CFE_2406
DNA repair and recombination proteins [BR:
cthm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFE_2406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
Motif
Other DBs
NCBI-ProteinID:
AVX21549
UniProt:
A0A2R4N3J1
LinkDB
All DBs
Position
complement(2368510..2369430)
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AA seq
306 aa
AA seq
DB search
MQHEFYWNPPAPTDLPGMLKRMRSAGQDVLYRLGENGLQKALSWDGRPVLLTVQEEGTVT
KPCWHIEVAGPELPPDWQERAIAYLSHVFCLNFDLPAFYQFCRQHLPLAALVERFYGQRM
ILEPTLYEAAISSIIAQQLNLSFCAQLKRNLLVRCNCQWHWEGVDWLLFPEPQQLVRLTA
EDLRLLKFSRSKAEYVLGVAQATATGQLNWSKVETMPEQEAMSYLISWRGIGRWTAECIL
LFGQGRSDLLPAADIGLRNAVGQLWGLGRQATEAEVREIGEGWRPYRSWVTHYLWLSLTE
NSGKDL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcaacacgaattttactggaatccccctgctcctaccgatttaccgggaatgctgaaa
cgaatgcgttctgccggtcaggatgtactctaccggctgggggagaatggtttacaaaag
gccctgagctgggatggtcgacctgttttattgacagtacaggaagaaggcacagtaacc
aaaccctgctggcatattgaggtggctggccccgagctaccgcctgactggcaggaacgg
gctattgcctatttaagccatgtcttttgcctgaattttgatttgcctgctttttatcag
ttttgccgccagcatcttcccctggctgctctggtggagcgtttctatggtcagcgcatg
atcctggagccgactctttatgaagcggccattagctctataattgcccagcagctcaat
ctcagtttttgcgcccagctgaaacggaatttgctggtccgttgtaattgccagtggcac
tgggaaggggtggactggctgttgtttcctgagccgcaacaactggtcaggttgaccgcg
gaagatttacgtttactcaagttcagccgcagtaaggcagaatatgtactgggagtggcc
caggctacagcaacaggccagctgaactggagcaaggttgaaaccatgccggaacaggag
gcgatgagctatttaatttcctggcggggcattgggcgctggacagcagagtgtatcctg
ctgtttggccaggggcggtcggacttgttgccggcagcggatatcggtttacgtaatgcg
gttgggcagctgtgggggctgggacgccaggcaactgaagctgaagtacgggaaatcggg
gaaggctggcggccctaccggagctgggtaacccattatctctggttgagtttaacagaa
aattcaggcaaagacttgtaa
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