Carboxydocella thermautotrophica: CFE_2503
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Entry
CFE_2503 CDS
T05389
Name
(GenBank) 23S rRNA m(5)U-1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cthm
Carboxydocella thermautotrophica
Brite
KEGG Orthology (KO) [BR:
cthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cthm03009
]
CFE_2503
Enzymes [BR:
cthm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CFE_2503
Ribosome biogenesis [BR:
cthm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CFE_2503
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
PrmA
Methyltransf_11
TRM5-TYW2_MTfase
PabTrmU54_TRAM_dom
N6_Mtase
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
AVX21646
UniProt:
A0A2R4N3E4
LinkDB
All DBs
Position
complement(2436160..2437509)
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AA seq
449 aa
AA seq
DB search
MKLIITDINHQGEGVGRLAGKVYFVPGALPGEEVEIEVTEEKKSWARARIINLHVPSAER
CQPHCPYFEQCGGCQLQQLAYSAQLAVKRELVQNTLKRIGKLDLGKVEVRSVLGMVEPWQ
YRNKVVWHVTKVNRRLRLGFFQRGGQQIIPIDYCLLLPLRLNQLKNKIEHLLNEINILPY
DWRNHTGQLRHIILRQTVTGQVMVGLVTVPEVSLKRRLMELASKLLGEEGVTTVVWNINQ
QKTREILGRENQTLAGPGFIEEEILGLKFQVSLAAFLQVNPRQTEVLYQQAAGAAALSGG
EKVIDAYCGVGSIALLMARQAAEVRGVEVVAEAIAAARVNATINRITNASFRVGLAEKIL
PEWEREGYRAQVIVVDPPRAGVELPALQAMAGMKPERIVYVACDVATLARDLARLQELGY
EPKWVQPVDMFPHTAHVECCCCLKRKKWS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgattattactgatattaaccatcaaggcgaaggagtaggacgcctggcaggc
aaggtttattttgtaccaggagccctgccaggagaggaagtagaaattgaagtaacagaa
gaaaaaaagagctgggcccgggctcgcataataaatcttcatgtaccatcggctgaacgc
tgccagccccattgcccttactttgaacagtgcgggggttgtcagttgcagcaactggct
tattcagctcagctggcagtaaaaagagaactggtacagaataccctgaaacggattggt
aaattagatctgggaaaagttgaggtcaggtcagtactgggcatggtagagccctggcag
tatcgcaataaggttgtctggcatgtaactaaagtaaatcgcaggttaaggctgggtttt
ttccagcgcgggggccagcaaataattcccattgattactgtctgctattaccactccga
ctaaatcagcttaagaataaaatagagcatctcctgaatgagattaatatcctgccttat
gattggcgtaaccataccgggcagctgagacatattattttacggcaaacagttacaggg
caggttatggtgggcctggtaactgttcctgaggttagcttgaagcgaagattaatggaa
ctggcctccaaattactaggggaggagggtgtcactactgttgtttggaacattaatcag
caaaaaacgcgcgagatattaggcagagaaaaccaaacactggcaggacctggctttatt
gaggaagagatactgggtttaaaatttcaggtttccctggcagctttcctgcaggtaaac
ccacggcagacagaggtcctttatcagcaggcagccggggcagcagctctcagcggagga
gaaaaagttattgatgcttattgcggtgtgggatctattgctctgctaatggcccggcag
gctgccgaggttcgcggagtagaggtagtggctgaagccattgctgccgcccgggtgaat
gcgaccattaacaggataaccaatgccagttttagagtgggattggcagagaagatttta
ccggaatgggagcgggaaggttaccgggcccaggtgattgtggtggaccccccacgagcc
ggggtggagcttcctgctctacaagccatggcgggtatgaaaccggaaagaattgtttat
gtagcctgtgatgtggctaccctggcccgggatttggcccgattacaggaactgggttat
gaaccgaagtgggtccaaccagtggatatgtttcctcatactgcacatgtggagtgttgt
tgttgcctaaaaaggaagaagtggagctag
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