Thermochaetoides thermophila: CTHT_0000130
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Entry
CTHT_0000130 CDS
T03100
Name
(RefSeq) putative rab guanyl-nucleotide exchange factor
KO
K20307
trafficking protein particle complex subunit 10
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cthr04131
]
CTHT_0000130
Membrane trafficking [BR:
cthr04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
CTHT_0000130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC10_1st
DUF7077
TRAPPC10
TRS130_4HB
NTS_TR130
Foie-gras_1
TPR_10
Motif
Other DBs
NCBI-GeneID:
18254051
NCBI-ProteinID:
XP_006690568
UniProt:
G0RXR6
LinkDB
All DBs
Position
Unknown
AA seq
1545 aa
AA seq
DB search
MEQPFSSSKVTVEYHDPHDVYKLLAPGLISRLPLRDLHWQSHAGPVRSISTLHIELVPAG
VDPSSLYTPTPSPNPPKTGQTDIQKDKDDGFIPASVAGRAGSTDARPSESSTASTTTSSA
STLKPPVTQAQRRHQIPGLRRTPYLKILLVRCDDNDTYKSTVRSEIREWIKTHTSTTTKG
AAENHDAFEWLIIHIVLPNSVAATQPRVSSHKGEGTDSKSSSSATRWRGSSTLLEKMRAD
FNGSAKGSVDRVRQIRIGINDVPYNMLPRVVPAVPTGYTETEAEAEQAWNELIGKMKELI
LASFDRRVSQYEEDIKEKDAQRALPGWNFCTFFILKEGLARGFESVGLVEDALVVYDELS
VGLDSIVAEQASSDNPAAHGGALLSYTEELKDIAQKALAELTGGRLEFGNDEEEVTLDAQ
PSSDKPSDAISGIPISTAHKPYRDLILANNVSLFDFRCYIFARQTALLLRLANAWSSREE
LLAKLKEQQELAPRGVAPRNLPSQKPVDEEEPENLLYLAEICRRTLEFVPGVSQVMRADV
LKAMGGEEAMGKELVEVVDNMVASFAFSVAQQILAQTSTKLLPIPPSVLGGPLATGEAAD
KVPELRTTTLPVRSSSLREGQKPPPSPGFPGPGRLEQELPVQRAGLEELAAQRAELCNLS
RNVLEECGKKRGWTDGWAGVPTVGETGVEEMEDIPLDGSSEPATKKEAEPEALYTSTAGV
SNATLRTALDNRDDFYRLYETLIDKALRHFTLAGHTHSVQASMADLAVLKYHLGEYAAAA
GYFYQVIPFFGESGWSLLELSLLVMYARCLKELGKVEDYVIKALRQLLCKAAAAEKERLA
SKSRVVAASVKGFPDVEAVKGFLGELITSSTSLERDVRIPLTSLFCKIAVDGPPWYDEAG
DGFSLFVDMYSLLVDEFEADSVRVRIVGVQGATVNREIWLSTAGKVTIHPGPNKIRVRST
VMMAGAFEADQIRVQAKRVVLHYERDAPLSSTLVGATQQPAQTPQVIQNARVVLYHRTSA
LDVVVSGPRHLQLDKRRFLDLELHTGWNELSNVEIRVRAATGGLRLLTHEAELFTSRDAN
PTKPATPGIFAFSDLAKNVTRLVRLPFTVEQDVVDVTVRVEVSYTTVSGTTYTLHKTASV
PIALALEVNVQDIFKHDALFSRFAVAPAQVGGEESPLRVVSAELKGSDIFEAEAGVLPEK
VVVFGRQPASLLWRIKRKKGVRKAGPGTTGTLYLRLGYTVLMEELDLLVRSRVQDELKNI
PSLSEMAKAVAGVVVSCLRRALDTTALERVALLGELDLTNLLQEINWERVCSSLGLEPPS
PSSPGGGGGLAPAAWIRQFITANPVLIVPETPVPDAKREITIPVDVPSVAVVHTADIKLH
CLDPANRSSELFPGTDTPSAGCPVVRVNQVLEATLHLRWTRRWDTSSLISSPSSPLPVGS
PNPGIGAEGQNSAWARDLEFGYEVTAPGDTWIIGGRRKGHFVIPSVMLPTDGKDEPDGIS
STPDTEAHIPLVLIPLREGYLPLPTVEIRESNDGSKHNNGLIPSI
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atggagcagccattttcttcctccaaagtaacagtcgagtaccacgacccgcacgatgtc
tacaagctcctcgcgcccggactaatctcccgcctgcccctccgcgacctccattggcaa
tcccatgccgggcccgtccgctccatttccacgctgcacatcgagcttgtcccggccggc
gtcgacccttcctcgctttacacccccacgccctcgcccaacccccctaaaactggtcaa
accgatatacagaaggataaagacgatggctttatacccgcctcggttgcaggacgcgcg
gggtcgacggatgcgaggccaagcgaatcctctaccgcgagcacgaccacgtcaagtgcc
tcgacgctgaagccgccggttactcaggcgcaaaggaggcatcagatccccggtctacgg
cgaaccccctatctaaaaatcctattagtccgctgcgacgacaacgatacctacaagagc
acagtccgctccgagatccgcgaatggattaaaacacacacctccacaacgaccaagggg
gcagccgaaaaccatgatgccttcgagtggctcatcatccacatagtccttccaaactcg
gtggcggctacccagccaagggtatcatcccacaaaggagaggggaccgattccaagtca
agcagttcggccacacgctggaggggatcaagtaccctccttgagaaaatgcgcgccgat
ttcaatggctccgccaaaggctccgtcgaccgcgtccgacagatccggattggcattaac
gacgtgccgtataacatgttgcctcgcgtggtgcctgccgtgccaactggctacacggag
actgaagccgaggcagaacaggcgtggaatgagctcatcggcaagatgaaggagttgatc
ctggcgagctttgatcgccgagtgagccagtatgaggaggatattaaggagaaggatgcg
caaagggcgttgccgggatggaatttctgtacgttttttatactcaaggaggggttggcg
cgggggtttgaaagtgtcggactcgtggaggatgccctggtggtatatgatgagttgagt
gtcgggctggatagtattgtcgctgagcaggcgtcgagcgataaccctgctgctcacggc
ggcgctctgctcagctacaccgaagagctgaaagatatcgcccaaaaggccctcgcggaa
ctaaccggcggacgtcttgagttcggcaacgacgaggaagaagtcaccctcgacgcccaa
ccctcttccgacaaaccctccgacgccatctctggcatacccatcagcaccgcccataag
ccctaccgcgacctcatcctcgccaacaatgtctccctcttcgacttccggtgctacatc
ttcgcgcgacaaaccgctctccttttacgcctagccaacgcgtggtcttcacgggaagaa
ctccttgccaagctgaaggagcaacaagagctcgccccgcgcggggtcgcccctcgcaac
cttccgagccaaaaaccggttgatgaagaggagccggagaatttgttgtacctggcggag
atttgtcgccggacactggagtttgtgccgggcgtgagccaggttatgagggccgatgtg
ttaaaagcgatggggggcgaggaagcaatggggaaagagttggtcgaggtcgtggacaat
atggttgcgtcgtttgcgtttagcgtggcgcagcagatcctcgcgcagacgagcaccaag
ttgttgcccatcccgccctcggtgttgggaggaccgctggcgacgggagaggcggcggat
aaagttcctgagttgaggacgactaccctgccagtgaggtcgtcaagtttgagggaggga
cagaaaccgcctccgagcccgggtttcccggggccgggacggctcgagcaggagttgcct
gtgcagagggctgggttggaggagttggctgcgcaacgtgcagagctgtgcaatttgtcg
agaaatgtgcttgaggaatgtgggaagaagaggggttggacggatggatgggcgggcgtc
ccgaccgtcggtgagacgggcgtcgaggagatggaggatatccccttagatggctcgtct
gagccagctacgaagaaagaagccgagcccgaggcattgtacacctccacagctggcgtc
tccaacgctactctccgcacagccctcgataaccgcgacgacttctaccgcctctacgaa
accctcatcgacaaagccctgcgccacttcaccctcgccggacacacgcactccgtccaa
gcctccatggccgacctcgcagtcctcaaataccacttgggagaatacgccgccgcagcg
ggctacttctaccaggtgatccccttcttcggggagtccggctggtctttgcttgagctc
agtctgctggtaatgtatgctagatgcctaaaagagttgggcaaagtcgaggattatgtg
attaaagcgctgcgacagctgctttgcaaggctgctgcggctgagaaggagcggttagca
agtaagagcagggttgttgcggccagtgtgaaagggttccctgatgtagaggcggtgaag
gggtttttgggggagttgatcacgtcctcgacgagcctggaacgagacgttcggattccg
ttgacgagtctgttttgcaagattgcggttgatggaccgccttggtatgacgaggcggga
gatgggtttagtttgtttgtggatatgtacagcttgctggtggatgagtttgaggcggac
tcggttagggtgaggatcgtgggcgtgcagggagctacggttaatagggagatttggttg
tctacggctgggaaggtgactattcaccctggaccgaataagattcgcgtccggagcacg
gtaatgatggcgggggcgtttgaggcggatcagattagggtacaagcgaagcgtgtggtg
ctgcactacgagcgggatgctcctctgtcctcgacgctggttggggccacccagcagcca
gctcaaacgcctcaggtcatccagaatgcccgcgtggtcctctaccaccgcaccagcgcc
ctcgacgtcgttgtgtctggcccgcgccatctgcaacttgacaaacggaggtttttggat
ctcgaactccacaccggctggaacgaactctccaatgtcgagatccgcgtgcgtgctgcg
acaggcgggctaaggctcctcacccatgaggcagagctcttcacgtccagggacgcgaat
cctacgaaaccggccacgcctgggatctttgccttctctgacctcgccaagaacgttacg
agattggtgcggttgccgtttacggtcgagcaggacgtcgtggacgtcacggtgcgcgtg
gaagtctcatacaccaccgtgtcggggaccacatacaccttacacaagactgcttctgtc
ccgatcgccctcgccctagaggtcaacgtacaagatatcttcaagcatgatgccttattc
tcccggttcgccgtcgcccctgcacaagtcggaggcgaggagtcaccattaagggtggtc
agtgccgagctcaaggggagcgacattttcgaggctgaggcgggcgtcctgccggagaag
gtcgtagtgtttggacgtcagccggcaagtttactttggaggatcaaacgaaagaagggg
gttcggaaggcgggtccggggacgactgggacattgtatctccggctggggtataccgtt
ttgatggaggaacttgaccttcttgttcgctctcgtgtacaagatgagctgaagaacatt
ccttcgctgagcgaaatggcgaaggcggtggcaggggttgtcgtctcttgcttgcggagg
gcactggatactactgcgttggagagggttgcgctgttaggggaactggatttgaccaat
ctcctgcaggagatcaattgggagcgcgtatgctcatccctcggcctggagcccccttct
ccttcgtcccctggcggaggaggcggtttggctccagcggcttggatcaggcagtttatt
acggccaacccggtgctgatcgtcccggaaaccccggtccctgacgcgaaaagggagatc
accatccccgtggatgtcccatctgtcgcggtggtgcatacagccgacatcaaactgcac
tgtttggatccagccaaccgaagtagcgagcttttcccggggacagacacgcccagtgcg
gggtgtcctgttgttagggtgaaccaagtgctggaggcgacgctgcatttaaggtggact
cggaggtgggatacgtcttctcttatttcgtctccttcgtccccgttgccggttggtagc
ccaaatcctgggattggcgccgaggggcaaaattcggcgtgggcgagggacttggagttt
gggtatgaagttactgcgccgggggatacgtggatcatcggggggaggaggaagggacat
tttgttattccttctgttatgcttcctactgatgggaaggatgagccggatgggataagt
tccacgcctgataccgaggcgcatattccgttggtattgatccctcttcgggaggggtac
ctccctctgccgaccgtcgagatcagggaatcaaatgatgggagcaaacacaacaacggt
ttgatcccatccatctag
DBGET
integrated database retrieval system
