Thermochaetoides thermophila: CTHT_0000720
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Entry
CTHT_0000720 CDS
T03100
Name
(RefSeq) DNA replication factor C-like protein
KO
K10756
replication factor C subunit 3/5
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03030
DNA replication
cthr03410
Base excision repair
cthr03420
Nucleotide excision repair
cthr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CTHT_0000720
03410 Base excision repair
CTHT_0000720
03420 Nucleotide excision repair
CTHT_0000720
03430 Mismatch repair
CTHT_0000720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cthr03032
]
CTHT_0000720
03036 Chromosome and associated proteins [BR:
cthr03036
]
CTHT_0000720
03400 DNA repair and recombination proteins [BR:
cthr03400
]
CTHT_0000720
DNA replication proteins [BR:
cthr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CTHT_0000720
DNA Replication Termination Factors
ELG1-RFC complex
CTHT_0000720
Chromosome and associated proteins [BR:
cthr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CTHT_0000720
DNA repair and recombination proteins [BR:
cthr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CTHT_0000720
Check point factors
HRAD17(Rad24)-RFC complex
CTHT_0000720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_30
AAA_assoc_2
AAA_22
AAA_16
AAA_11
AAA_24
RuvB_N
AAA_28
AAA_3
AAA_19
DUF815
AAA_5
ResIII
AAA_14
PhoH
DNAX_ATPase_lid
DEAD
SLFN-g3_helicase
AAA_7
Mg_chelatase
ATPase_2
AAA_18
RNA_helicase
TAFII28
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
18254110
NCBI-ProteinID:
XP_006690626
UniProt:
G0RYV6
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MSDYEDEMDIDISSKSIIFSANNTAKGKRSVGNLPVEAEDSLPWVEKYRPATLSDVSGHQ
DILATINKFIESNRLPHLLFYGPPGTGKTSTILALARRIYGAENMRQMVLELNASDDRGI
EVVREQIKTFASTKQIFTMGSSAGRAGIAAFKLIILDEADAMTNTAQMALRRIMEKYTAN
TRFCIIANYSHKLSPALLSRCTRFRFSPLKEQDIRSLVDKVIEEENVKITPDAVESLVKL
SRGDMRRALNVLQACHASSTPLQLRDGPKIPGDQIVRDTITTETIYNCVAAPPPDAIKKI
LNTLLSTSDVTACLTIINMLKISQGLALADIITSLSEELVKLEVKPQVMITWLDALAEIE
YRVASGANEAIQTAAVVGAVRNGVELMG
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactacgaggacgagatggacatcgatatctcatccaagagcatcatcttttct
gcgaacaacacggccaaggggaagcgaagtgttggaaatttgccagttgaggcagaagac
agtctaccatgggttgagaaataccgcccagcaacgctctcggatgtgtcgggtcaccaa
gacattctggcgaccatcaacaagtttatcgaatcaaaccgacttccccatctccttttc
tacggccctcctggtacaggaaagacctctactattcttgccctcgctcgtcgaatctat
ggcgcggaaaacatgcgccaaatggtgctggagctcaacgcttcggatgatcgtggtatc
gaagtggtgcgggaacagatcaagacttttgcctcaacaaaacagatctttacaatggga
tcgtcagcaggccgggcgggtattgcggcgttcaagctcatcatcctcgacgaagcggac
gccatgaccaacacagcccagatggcgctgcgccgaatcatggagaagtacaccgctaac
acgcggttctgcatcattgccaactactcccacaagctcagccccgcgctgctttcacgg
tgtacccgtttccgcttcagtcccttaaaggaacaagatatccgcagcttggtggataag
gtgattgaggaggagaacgttaagattacgcccgatgctgtggaatcgctggtgaagttg
agcagaggtgacatgcgtagggcgctgaacgtgcttcaggcctgccatgcatcaagcaca
cccctccaactacgcgatggccccaagatccccggagaccagatcgtgcgcgataccatc
acaacagaaactatctacaactgcgtcgctgctcctccgccagatgcgatcaagaagatc
ctcaatacgctgttgagcacgagcgacgttaccgcgtgtctgacaataatcaacatgctc
aaaatctcacagggcttggccctagccgatatcataacctccctgtcagaagaactggtg
aagctggaggttaagccccaggtgatgatcacttggctggatgcgttagcagagattgag
tacagagtcgcgagcggcgctaacgaggcgatacagaccgccgctgtggtgggagcagtt
cggaacggcgtcgagttaatgggctga
DBGET
integrated database retrieval system
