Thermochaetoides thermophila: CTHT_0001560
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Entry
CTHT_0001560 CDS
T03100
Name
(RefSeq) putative ubiquitin fusion degradation protein
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr04120
Ubiquitin mediated proteolysis
cthr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CTHT_0001560
04120 Ubiquitin mediated proteolysis
CTHT_0001560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cthr04121
]
CTHT_0001560
Enzymes [BR:
cthr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
CTHT_0001560
Ubiquitin system [BR:
cthr04121
]
Ubiquitin ligases (E3)
U-box type E3
CTHT_0001560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
18254194
NCBI-ProteinID:
XP_006690705
UniProt:
G0RZ35
LinkDB
All DBs
Position
Unknown
AA seq
1104 aa
AA seq
DB search
MDPSRPPASVPDAPDKETMEQIRLRRLARLGGPPPSGSSPGSPRSGTPLNAGLSAAKPSD
DKTGGGNGDVTKPSAAPTEKHAQISITPAPAASSPSSTGSMDSHQSRPKRRASEVDGLAA
TTPPRKQTPREESFEDYSDRILSTIFRVSVDPNKTADGHGHKLIFLSNLSQELADEGAPL
KLSVERIEQAIVEGASSIPHNRPLFDYLLPCWKRVNRALKLLRGPAPEKEAMLKEARRLC
FSNCIFALTMPELFSREPNPQHDTLVPYLLRDLDSDDGLDLDFISEAVTRMPEDDTVAPL
FTTAMVDISQKLSTMSMNDDYKPYVNALLKYSKFPALLNALAEHPCFQMAQSAPNIERDT
ILGPFFRISPLQPEVTTVYFASPRTMDKGRIQTSQNALQMTLAAHQNDLKDIINAFIRAS
PQTRNKTLDWFAYIMNVNHKRRAMQVDPREVASDGFMMNVTVILDILCEPFMDSTFSKVG
RIDIDYFRKNPRVDIKDETKLNADQARSDAFYAQKLEGETNFITEVFFLTLAAHHYGSEA
TNSKLKNLERDIKYYEKNIALMEAERPKLLSRPHELRRLDEALKRHQTVLDRALALKYSI
EGVLLEQKMQSRSLQFMRYVTVWLLRVASQTDYTPDKQLVLPLPKDQPEAFRCLPEYALQ
DIVDNFKFVFRYIPQIILSAVGDEMIALCITFLESSEYIKNPYLKSSLVTLLSHGTWPTY
HLKKGVLGDLLISSKFANDYLLHAIMKFYIECEQTGVSSQFYDKFNIRYEIFQVIKCVWV
NDLYRHQLVESSKTNRSFFVRFVNLLLNDATYVLDEGLSKFPKIHDLQVKLKDPNLPSQD
REKAEEDLRTAEAQATSYMQLANETVGMMKLFTTTITDSFTMPEIVHRLAGMLDYNLDIL
TGPKSKTLKVENPEKYFFNPKTLLPELVDIYLNLRKSTAFIEAVAADGRSYSPTTMETTA
RILSSKGLKPPEDLQAWHELSEQIYQAKLSLDQADMDFDDAPPEFEDPIMGIIMDDPVIL
PSRHVVDRSTIVQHLLSDPKDPYTRQPMTVDDIVPDDELRERIRKWKEEKRRERQRERER
KEREVEGDEGGHKGGQADKMDLGE
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagccgaccaccggcatctgtgccggatgcccccgacaaggagacaatggaa
caaattcgcctgaggaggttggccagacttggtggccctcctccttcgggttcctcacca
ggttcgccgcgcagcgggactccgttaaatgccggacttagcgcagcgaagccttcggat
gataagacgggcggcggcaacggcgatgttacgaagccctcagctgccccgaccgaaaag
cacgcccaaatcagtattacccctgcccctgcggcatcctcgccgagctcaacaggtagt
atggacagccaccagtctcgaccaaaacgacgagcatcagaggttgatgggttagcagca
acaacgcccccgcgcaagcagactcctcgcgaggaatccttcgaggattattccgaccgc
atcctctcgaccatctttcgcgtgtccgtcgatccgaacaagacggccgacggccatggc
cacaagctcatcttcctctccaacttgagccaggagcttgccgacgagggcgctccgctc
aagctgtcggtcgagaggatagagcaagccatcgttgagggcgcctcgtccattccacat
aaccggcccctatttgattaccttcttccttgctggaagcgtgtgaaccgcgcgctcaag
ctgctccgtggccctgcgcctgagaaggaggctatgctcaaagaagcccggcggttgtgc
ttcagcaactgcatctttgccttgactatgccggagctgtttagccgcgagccgaacccc
cagcatgatacgctggttccttacctactgcgcgatctcgatagcgacgacggcttggac
ctggactttatcagcgaagctgttacccgcatgcctgaagacgacacggttgcgccgctg
ttcaccactgctatggtcgacattagccagaagctctctacgatgagcatgaatgatgat
tacaaaccttatgttaatgccctgttgaaatattccaagttccccgctctgctcaatgcg
ctggcagagcacccttgcttccagatggcgcaatcagccccgaatatcgagagagacacg
attcttggccccttcttcaggatatcgcccttacaaccggaagtgactactgtctacttc
gccagcccccggaccatggacaagggccgtatccagacctcccagaatgctctgcagatg
acccttgcggcgcaccagaatgacctcaaagatatcatcaatgcttttattcgggcaagc
ccgcagacgcgtaacaagacgttggactggttcgcctacatcatgaacgtcaaccacaag
cgccgtgccatgcaggttgacccgcgcgaggtggcgtcggacgggttcatgatgaacgta
accgtcattctcgacatcctttgcgagccgtttatggacagcaccttctccaaggttggc
cgtattgacatcgactacttccggaagaacccccgggtcgatatcaaggacgagaccaag
cttaatgcggaccaggcacggtccgatgctttctacgcccaaaagctcgagggagagacc
aacttcatcacagaggtcttcttccttacccttgcagcccaccactatggcagtgaggcg
accaattcgaagctcaaaaaccttgagcgcgatattaagtattacgagaagaatatcgcc
ctgatggaggccgagcgccccaagttgctgagccgacctcatgaactccgacggcttgac
gaggcgcttaagcggcaccagaccgtgctggatcgtgcacttgccctgaagtactctata
gaaggcgtgctactggagcagaagatgcaaagccggtctctgcagttcatgcgctatgtg
accgtctggctgcttcgggttgccagccagactgattacacgccggacaagcaacttgtt
ctcccgctacccaaagatcagccggaagcattccgttgtctccccgaatatgcactccag
gacattgtggacaatttcaagtttgtcttccggtacatcccgcaaatcatcctatcggcc
gttggtgatgagatgatcgcgctgtgcatcaccttcctggagtcgtccgagtacatcaag
aacccgtatctcaagtcttccctcgtgacattgttgtctcacgggacatggccgacgtat
caccttaagaagggcgtcctgggcgacctgctgatcagctccaagttcgcgaacgactac
ctgctccatgcgatcatgaagttctacattgagtgcgagcagacgggcgtttcgtcgcag
ttttatgacaagtttaatattcgctatgagatcttccaggttattaagtgcgtctgggtc
aatgacctgtaccggcaccagctggttgagtcgagcaagaccaaccgatcgttcttcgtc
cgctttgtcaacctgctgctgaacgacgccacatacgtgctggacgagggcctgagcaag
ttccccaagatccacgacctgcaggtcaagctgaaggacccgaacctgccctcgcaagac
cgtgaaaaagccgaggaagacctgcgcaccgccgaggcccaagcaacgtcttacatgcag
ctcgccaacgaaactgtcggcatgatgaagctcttcacgacaaccatcactgactccttc
accatgcccgagattgtgcaccgcctggccggcatgctcgactacaacctcgacatcttg
accggccccaagtccaagacactcaaggtcgagaaccccgaaaaatacttcttcaacccg
aagaccctgctccccgagctcgtcgacatctacctcaacttgcgcaagagcaccgctttc
atcgaggccgttgccgcagacggccgctcgtacagccccactaccatggaaaccactgcg
cggattctctccagcaagggcctcaagccgccggaggacttacaagcctggcatgagctc
tctgaacagatctaccaagccaagttgagcctcgaccaggccgacatggactttgatgac
gcgcctcccgagttcgaggacccgattatgggtattatcatggacgaccctgttattctg
ccgtcgaggcacgtggtcgatcgctcgaccatcgtgcagcacttgctgagcgatccaaaa
gatccctatacacggcagccaatgacggtggatgacattgtgccggatgatgagctgagg
gagaggattcggaaatggaaggaggagaagcgcagggagaggcaaagggaaagggaaagg
aaggaacgggaggtggagggtgatgagggagggcataaggggggacaagcggataagatg
gatttgggggagtga
DBGET
integrated database retrieval system
