KEGG   Thermochaetoides thermophila: CTHT_0002060
Entry
CTHT_0002060      CDS       T03100                                 
Name
(RefSeq) putative autophagy protein
  KO
K17908  autophagy-related protein 18
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr04136  Autophagy - other
cthr04138  Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04138 Autophagy - yeast
    CTHT_0002060
   04136 Autophagy - other
    CTHT_0002060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cthr04131]
    CTHT_0002060
   03029 Mitochondrial biogenesis [BR:cthr03029]
    CTHT_0002060
Membrane trafficking [BR:cthr04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    CTHT_0002060
Mitochondrial biogenesis [BR:cthr03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    CTHT_0002060
SSDB
Motif
Pfam: PROPPIN Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 BCAS3_WD40 ANAPC4_WD40 Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_WDR19_1st WDR55 EIF3I Beta-prop_WDR35_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_Vps41 Hira Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_DCAF12 Beta-prop_IFT140_2nd Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 18254244
NCBI-ProteinID: XP_006690754
UniProt: G0RZ84
LinkDB
Position
Unknown
AA seq 446 aa
MAATLNYVTFNQDHSCLAVATSKGFRIFHTEPFAKVFNSEDGHVSIIEMLFSTSLVALVL
SPRHLVIQNTKRGSVICELTFPSAVLAVRLNRKRLAVVLEEEIYLYDISNMALVSTIATS
PNPNAIFALSPSSERCYIAYPLPKAREDNGERRPAHAPPLSTYVPPTSGEVLIFDALTLK
AVTVIEAHKSPLCCVALNSDGNLLATASETGTIIRVFAVPSGQKLYQFRRGTYPSTIYSM
SFNLSSTLLCVSSASETVHIFRLVTPQTASSAASRDADIPSSPRANRWSRSLSVDSTDYP
GSSVGEVGEPSPNNNGTSSKRSSGSFGSLLRRSSQLVGRSVAGAVGSYLPQSVTEMFDPQ
RDFASFKIPRPHQNGGRSGALMGGSSAPLRSVVAMSSSSPQVMVVTSDGHFYVYNIDMQR
GGECPLVKFVSVLDPEEKLDASAYGV
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggctgcgacattgaattatgtcaccttcaaccaagaccacagctgtcttgctgtggct
acctcgaaaggcttccgtatcttccacaccgagccttttgccaaggtattcaatagtgaa
gatggccatgtctccatcatcgagatgctcttttccacgtccctggtggccctggtcttg
tcaccgcgacatctggtcatccagaacacaaagcgcggctccgtcatttgcgagctaacc
ttcccttccgccgttctcgccgtgcgactcaacagaaagcgtctagccgttgttcttgag
gaggagatctacttgtacgacatctcgaacatggctttggtgtcgacaattgcgacttcc
cctaatccgaatgccatctttgccctgtcgccatcatcggagcgctgctacattgcttac
cccctacccaaggctcgggaagacaacggcgagaggcgaccggctcatgctcctccactg
tcgacctacgtccctcctacctcgggtgaagtcctcattttcgatgctttaaccttaaag
gcagtaaccgtcatcgaagcccacaagtctcccctttgctgtgtcgccctcaacagcgat
ggcaacctcttagcaaccgcctctgaaaccggcaccatcatccgtgtcttcgctgtccct
agcggccagaagctctaccaattccgccgtggcacctatccctcgaccatttacagcatg
tccttcaacctaagctctaccttgctatgcgtctcatccgcctcggaaaccgtccacatc
ttccgcctagtcaccccccagacagccagctcggccgctagcagagacgccgacataccc
agttcgccccgtgccaaccgctggtcccgctctctcagcgtcgacagtaccgactacccc
ggcagcagcgtaggcgaagttggcgagccgtccccaaacaacaacggaaccagcagcaag
cggtcaagcggcagcttcggcagccttcttcgccgatcatctcaactcgtcgggcgtagc
gtcgccggtgccgttggctcctacctgccgcagtccgtcacagagatgttcgacccacaa
cgcgatttcgccagcttcaagatcccgcggccccatcagaacggaggtcgtagcggcgcc
ctgatgggcggatcctcggcgcccctgcgcagcgtcgtcgctatgagcagtagctcgccc
caggtcatggttgtgactagcgacggtcacttctatgtgtataacattgatatgcagcgg
ggcggcgagtgtccgctggtcaagttcgtctccgtcctggatccggaggaaaagttggat
gcttcggcttatggcgtgtga

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