Thermochaetoides thermophila: CTHT_0002080
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Entry
CTHT_0002080 CDS
T03100
Name
(RefSeq) DNA-directed RNA polymerase-like protein
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CTHT_0002080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthr03021
]
CTHT_0002080
Enzymes [BR:
cthr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CTHT_0002080
Transcription machinery [BR:
cthr03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CTHT_0002080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
18254246
NCBI-ProteinID:
XP_006690756
UniProt:
G0RZ86
LinkDB
All DBs
Position
Unknown
AA seq
1157 aa
AA seq
DB search
MAPAPLDDGFEALLEPFYNGKKLTDPISTKEDKYQLLPAFLKVKGLVKQHIDSYNFFVEH
EIKDIVRANRSIRSDQEKDFWLEFTDIRVLTPTRNDYSDFKARDEVTPMECRLRDMTYAA
PVVVDIVYSRDRKRIVRKDIPLCRIPVMLKSSKCVLSKATNAQMEIMNECPLDPGGYFII
NGTEKVILIQEQLSKNRVIVEADEKTGGVQASVTSSTHERKSKTYVILKKDRIVLNHNVL
VEPIPIVIVLKALGGLSDYQILELVAGGDALYQDDFLVNFDEATRAGVFTQQQALEYIGL
RVKMGGSKKGRSPNAPRRSPVEEGLDALTNLIIAHITIEDLDFYPKAIYIAMMVRRVLMA
AHNPKLIDDRDFVGNKRFELAGQLLSLLFEDQFKMFIASLKGNMEYFFKKPNRTSAYDPV
GPISSQGQYITQGLNRAIQSGNWTVRRFNMNRAGVTHVLSRLSYISALGMMTRISSQFEK
TRKVSGPRALHPSQWGMLCTSDTPEGEACGLVKNLALMTHITTNADEEPVKDCIFDLVPG
VEPIRVFTGSEMHRPGSYIIHLNGTPFALTRHPKQFAARFRTLRRRGHISPFVSIHTNEH
FSAIHIATDEGRICRPYIIVKDGKSRLKPEHLRLLQLGKASFDDFLRLGVVEYLDVNEEN
DALIAMNEDEITRATTHMEIEPFTILGAVAGLIPFPHHNQSPRNTYQCAMGKQAIGAIAY
NQFNRIDTLLYTLVYPQRPMVITKTIQLIHYDKLPAGQNATVVVMSYSGYDIEDALVLNK
ASCDRGFGRCQVFRKYTAELQQYANGRKDRLGGPQKDEEGRTIAKHACLDRDGLAIVGYQ
IRSGETMIMKETPVDVTSTGIGGDRGSDAYVPAPVNYRINDPAYIDKVMVSNTEKNTAII
KVQTRQTRRPELGDKFSSRHGQKGVVGIIVNQEDMPFSDSGIVPDIIMNPHGFPSRMTVG
KLFECLTGKAAVVAGRPDYGFGDAFRSHPVEEMGRVLIEHGFSWEGKDYFTSGITGNPHE
AYLFNGPIYYQRLKHMVQDKMHSRSRGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYG
ASQLLLERLMISSDATQVDVCEACGLFGYKGFCQTCQSTANVTQMTMPYAAKLLVQELIS
MNVGVRMQLEDKFPHPR
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgcacccttagacgacggcttcgaggccctgctggagcctttctacaatggc
aagaagctgacagaccctatctcgacaaaggaggacaagtaccagttgctgcctgccttc
ctgaaggtcaagggtcttgtcaagcagcacatcgactcgtacaatttcttcgtcgagcac
gaaattaaggacattgtccgcgccaaccgctccattcgcagcgatcaggagaaggacttc
tggctcgagtttaccgatatccgcgttcttaccccaactcgcaatgattactccgatttc
aaggcgcgggacgaggtcactcccatggagtgccgtctacgcgacatgacttatgccgct
cctgtcgtcgtcgacatcgtctactcgcgcgaccgcaagcgcatcgtccgcaaggacatc
ccgctctgccgcatccccgtcatgctcaagagctccaagtgcgtgctcagcaaggccacc
aatgcccagatggaaattatgaacgagtgtcccctcgaccctggtggttactttatcatc
aatggcacggagaaggtcatcctgattcaggagcagctcagcaagaaccgtgtcatcgtc
gaggcagatgaaaagaccggtggtgtgcaggcctccgtaaccagttcgactcacgaacgc
aagtcgaagacctatgtcattctcaagaaggaccgcatcgttcttaaccacaacgtcctc
gtcgagcccatcccaattgtcatcgttctcaaggccctcggtggcctctctgactaccaa
atccttgagcttgtggctggcggtgatgctctgtaccaggatgacttccttgtcaacttt
gacgaagctacccgcgccggcgtgtttacgcaacagcaggctctggagtacatcggtcta
agggtcaagatgggtggttcaaagaagggtcgatcgcccaatgcaccgcgtcgaagcccg
gttgaggaaggtcttgatgcacttacgaatctcattattgcccacattactatcgaggac
ctcgacttctacccgaaggccatctacatcgctatgatggtccgtcgcgtcctcatggcc
gcccataatcctaagctgatcgatgatcgtgatttcgttggcaacaagcgattcgagttg
gccggtcagctgctctcgctgctattcgaagatcagttcaagatgtttattgccagcttg
aagggaaacatggagtatttcttcaagaagcccaaccggacgtcggcctatgatcctgtc
ggtcccatcagcagtcaaggtcaatacattacccagggtctgaatcgcgccatccagagc
ggtaactggacagtcagacgtttcaacatgaaccgtgcgggtgtcactcacgtcctgagt
cgactcagttacatctcggcgctcggtatgatgacccgtatcagcagccagttcgagaag
accaggaaagtcagtggtccccgtgcgcttcacccatcgcagtggggtatgctctgcaca
tctgatacccccgaaggtgaagcttgcggtctggtcaagaacttggccctcatgacacac
atcaccacaaacgctgatgaggagcccgtgaaggattgcatcttcgatctggtccctgga
gttgagcccatccgtgtcttcaccggtagcgaaatgcaccgcccgggctcctatatcatc
catctaaacggtacgccatttgcgctgacccgacatcctaagcaattcgccgcgcggttt
agaacgttgcgccgtcgtggtcacatctcgccgtttgtcagtatccataccaacgagcac
ttctcggctatccacattgccacagatgaaggtcgcatctgcaggccgtatattattgtc
aaggatggcaagtcgaggttgaaaccagagcatttgaggcttcttcaactgggtaaggcc
agttttgatgacttcttgaggctcggagtggtcgaatacctcgatgtcaacgaggagaac
gacgcactgattgccatgaacgaggatgagatcacacgcgcgacaacccacatggagatt
gagccgtttacaattctgggtgccgtcgccggcctgattccgttcccccaccacaatcag
tctccccgtaacacctaccaatgcgccatgggtaaacaagccattggtgcaattgcttac
aatcagtttaaccgtattgatacccttctctacacgctggtgtacccccagcgacccatg
gtcattaccaagaccattcagctcattcattacgacaagctgccggccggccagaacgca
acggtcgtggttatgtcatactcgggttatgatatcgaagacgcgctggtgttgaacaag
gcttcatgcgatagaggcttcggacgctgccaagtgttccgcaagtacacggccgagctg
cagcagtatgccaacggccggaaagatcgcctgggcggaccgcagaaggatgaggagggc
cgcacgatcgccaagcacgcttgcctggaccgcgacggtcttgccattgtcggttaccag
atccgctccggcgagaccatgatcatgaaggagactcctgtagacgtgacgtcaactggc
atcggcggtgaccgcggctcggatgcctatgtccctgcccctgtcaactaccgcatcaac
gacccagcttacatcgacaaggtgatggtgtcgaatacggagaagaacacagccattatc
aaggtccaaactcgccagacccgtcgccctgagctcggcgacaagttctcctctcgccac
ggtcagaagggtgttgtcggcattatcgtcaaccaggaagacatgcccttctccgacagc
ggtatagtgcccgacatcatcatgaaccctcacggttttccctctcgaatgacagtcggc
aagctcttcgaatgcttgaccggcaaggccgccgtcgtcgccggccgccccgactacggc
ttcggcgacgccttccgctcccaccccgtcgaggagatgggccgcgtcctcatcgagcac
ggcttctcctgggaaggcaaggactacttcacgtccggcatcacgggcaacccgcacgag
gcctacctcttcaacggtcccatctactatcagcgtctgaagcacatggtgcaggacaag
atgcactcccgctcgcgcggtcctcgcgccatcctcacgcgccagccgacggaaggtcgt
tcgcgcgacggtggtctgcgtctcggtgagatggagcgcgattgtttgattgcatatggt
gctagccagctactgctggagcgcctgatgattagctcggacgcgacgcaggtcgatgtg
tgcgaggcgtgtgggttgtttggctacaagggcttctgccagacttgccagagcacggcg
aatgttacccagatgaccatgccgtatgcggcgaagctgcttgtgcaggagctgatcagt
atgaatgttggtgtgaggatgcagttggaggataagttccctcatccgaggtag
DBGET
integrated database retrieval system
