Thermochaetoides thermophila: CTHT_0002210
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Entry
CTHT_0002210 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cthr03009
]
CTHT_0002210
Ribosome biogenesis [BR:
cthr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CTHT_0002210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
WDR54
Motif
Other DBs
NCBI-GeneID:
18254259
NCBI-ProteinID:
XP_006690769
UniProt:
G0RZ99
Structure
PDB
PDBj
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MDTSEAVDLAPAPAKQGRQANGAHSIANARTEFRSKAELDRIRRYKQAQKKYGRGPRVDI
KSVRDKKLRRTLTNLENKYKTAALKAKEAEILLENQTGFLEPEGELERTYKVRQDEIVKE
VAVEVAQKKFELKLTELGPYTCEYSRNGRDLILAGRKGHVATMDWREGKLGCELQLGETV
RDARFLHNNQFFAVAQKKYVYIYDHNGVEIHCLRKHVEVSHMEFLPYHFLLATLSISGQL
KYQDTSTGQIVAEIATKHGTPVSLTQNPYNAILHIGQQNGTVTLWSPNSTDPLVKLLAHR
GPVRSLAVDREGRYMVSTGQDNKMCIWDIRNFKEAVNSYFTRAPATSVAISDTGLTAVGW
GTHTTIWKGLFNKERPVQVKVDSPYMTWGGQGQVVERVRWCPFEDILGIGHNEGFSSIIV
PGAGEANYDALEVNPFETKKQRQEGEVKALLNKLQPEMIALDPNFIGNLDLRSEKQRQAE
RDLDQPAQDIVEELRKKARGRNTALKKYLRKQRKKNIIDEKRLKAEELYRQMQEKRDGQT
KEKQAEVGPALARFVRKE
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggacacatcagaagccgtcgatctcgctcccgccccggcgaagcagggccggcaggcc
aatggggcgcactccatcgccaatgccaggacagaatttcggtccaaggcggaactcgac
cgcatccgccgctacaagcaggcccagaagaagtacggccgcgggccgcgcgtcgacatc
aagagcgtgcgtgacaagaagctacgccgcactctgacgaacctcgagaacaagtacaag
actgccgcgctcaaggccaaggaggccgagatcctgctcgagaaccagactggcttcctc
gagcccgagggcgaactcgaacggacgtacaaggttcgccaggatgagattgtcaaggag
gttgccgttgaggtcgcccagaagaagtttgagcttaagcttacggagctggggccgtat
acgtgcgagtacagcaggaatggtcgggacttgatcctggccgggaggaagggccatgtc
gcgaccatggactggcgcgagggcaagctgggttgtgagctgcagctgggcgagactgtt
cgggacgcgcgcttcctgcacaacaaccagttctttgctgtggcgcagaagaaatacgtc
tatatctacgaccacaatggtgtcgagatccactgcctgaggaaacatgtcgaggtgtca
cacatggagtttctgccgtaccactttctcttggccactctgagcatcagcggccagctc
aagtaccaagacacctcgaccggccagatcgtggccgagatcgccaccaagcacggcacc
cccgtgtcgctcacacagaatccatacaatgctatcctccacatcggccagcagaacggc
accgtcacattatggtcgcccaactcgaccgacccgctcgttaagcttctggcgcaccgc
ggccccgttaggtcacttgccgtggaccgcgaaggccggtacatggtctcgacaggccaa
gataacaagatgtgcatctgggacatccgcaacttcaaggaggctgtcaacagctacttc
acacgggcgccagccacttctgtggcaatctccgacacaggtcttaccgcagtaggctgg
ggcacgcacactacaatctggaagggcctctttaacaaggagcggcctgtccaagtcaag
gttgacagcccgtacatgacgtggggcgggcaaggccaagtcgtcgagcgtgtgcggtgg
tgtcccttcgaagacatcctcggcatcgggcacaacgaaggtttttcgtcaatcatcgtc
cccggcgcaggcgaagccaactacgacgctctggaggtcaacccgttcgagacgaagaaa
cagcgccaggagggcgaggtcaaggcgctgctcaacaagctgcagcccgagatgattgcc
ttagatcccaacttcatcggcaatttggacctgcggtccgagaagcagcggcaggcggag
cgggatctggatcagccggcgcaggatattgtcgaagagctgcgcaagaaggcgcgtggt
cggaataccgcgctcaagaagtacctgcgcaagcagcgcaagaagaatattattgatgag
aagcggcttaaggccgaggagctgtatcggcagatgcaggagaagcgggacggtcagacg
aaggagaagcaggccgaggtggggcctgcgttggcgaggtttgtgaggaaagaatag
DBGET
integrated database retrieval system