Thermochaetoides thermophila: CTHT_0003460
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Entry
CTHT_0003460 CDS
T03100
Name
(RefSeq) putative transcription initiation factor
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CTHT_0003460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthr03021
]
CTHT_0003460
Transcription machinery [BR:
cthr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
CTHT_0003460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta_N
TFIIF_beta
Tau95
Polyoma_lg_T_C
Motif
Other DBs
NCBI-GeneID:
18254384
NCBI-ProteinID:
XP_006690892
UniProt:
G0RZM2
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MAEQTQIKPEPDAGSPYVDEALDETPDLEFYDKFPNANECARMYLARLPSYLWQVWSQLD
DDAEIEIGSIRQWFDKDGNLKLRLRLKPDLAVHQPLPKEYNMDVVNHDVHNTFIFTEQDL
PSYAAKNKERANALAQGIPAHLLRKQQRQTEQPVEQRGTKRGAPYARKPIPKKTRIAGRI
KHEVVCTPAQNAETDRFLYLRAQEAQKVREQVQIVDKLPPNGITNRDDWENYLKTSTKPT
KQKKMENKATRWPENQLMDEIAKCFSQHKYWSIKAFRQRIPQPEAYIRECLEKVAVLQRS
GKFANNWSLKPEFQNLLAELPKPADDAAVPRADVPSEDEDDEDIRMEDVI
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcaaacacaaatcaagccagagcccgacgcgggcagtccctatgtcgatgaa
gcgctcgatgagacgcctgatttggagttctacgataaattcccaaacgccaacgaatgc
gctcgcatgtatctggcccgtctgcccagctacctctggcaggtctggtctcagctggat
gacgatgctgaaatcgagattgggtcaattcgtcaatggtttgataaggatggcaacttg
aagttgagattacgcctcaagcccgacttggcggttcaccagccactgccgaaagagtat
aacatggatgttgtaaaccacgatgtgcacaatacgtttatcttcaccgagcaggatctc
cctagctatgccgcaaagaacaaggagcgagccaatgccctggcccagggtattccagct
catctgctacgtaagcagcagaggcaaacagaacagcctgtagagcagcgcggcacgaag
aggggggcaccatacgctcgcaagccgattccaaaaaaaactcggatcgccggcaggatc
aagcatgaagtcgtttgcactcccgcgcaaaatgccgagacggaccgcttcctttacctg
cgtgcccaggaggcacagaaggtgagggagcaggtccagatcgtcgacaagctgccgccc
aatgggattacgaatcgcgatgattgggagaactatctcaaaacaagcaccaagccgacg
aagcaaaagaagatggagaacaaagcgactcgctggcccgaaaaccagctcatggacgag
atcgccaagtgcttctcacagcacaaatactggtcgatcaaggccttccgccaacggatc
ccgcagcccgaggcctatatccgcgaatgtctcgagaaggttgccgtgttgcagcgctct
ggcaagtttgccaacaactggtcactcaaacctgagttccagaacttgctggccgagctg
cccaagcctgccgatgacgctgctgtgcccagggcagatgtgccgtcggaagatgaggat
gatgaggacatcaggatggaggacgtcatttag
DBGET
integrated database retrieval system
