Thermochaetoides thermophila: CTHT_0004460
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Entry
CTHT_0004460 CDS
T03100
Name
(RefSeq) putative transcription factor
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03022
Basal transcription factors
cthr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CTHT_0004460
09124 Replication and repair
03420 Nucleotide excision repair
CTHT_0004460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthr03021
]
CTHT_0004460
03400 DNA repair and recombination proteins [BR:
cthr03400
]
CTHT_0004460
Transcription machinery [BR:
cthr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CTHT_0004460
DNA repair and recombination proteins [BR:
cthr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CTHT_0004460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
UVB_sens_prot
Motif
Other DBs
NCBI-GeneID:
18254484
NCBI-ProteinID:
XP_006690986
UniProt:
G0RXV8
Structure
PDB
PDBj
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MSAQDAVDASEHYEVWNTDDIPSLRTIIIDTNPRAWAALADVLPLSKAIANILIFVNAHL
AFSNSNQVAIIASHTNRAVWLYPQPPEPLPSGSSSHDAAARKSATIGKYPQFAQIEKSLL
SSIRALMDDTTPSDLDTTTTQISGALTLALAHINKTALSLTASNTAAAAVATGHSLTAGS
AASVAAKAASTSTSAGLAGLHARILIISVSDSSAAQYIPTMNAVFAAAHARIAIDTLALR
GSATFLEQASFITRGTFIRAAEPRGLLQYLMFGFGSGSAPSNPAAAAAAAEKSTIGGPKP
SGAAAAQPAAGTTKPGAAGKLPPGAAVTDLLMTPSAEAVDFRAACFCHRNVVDTGFVCSV
CLSIFCEVPPGGECMTCGTKLALGDYGKMPAAAVEAVAKLIQAKAGAENGATSPSARKEK
RKAGTNGEI
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccaggacgccgtcgacgcctcggagcactacgaggtgtggaacacggacgac
atcccgtcgctgcgcaccatcatcatcgacacgaacccccgcgcctgggccgccctcgcc
gacgtgctgccactgtccaaggctattgccaacattctcatttttgtcaacgcccactta
gccttcagtaattcaaatcaggtcgccatcatcgcgtcacataccaaccgcgccgtctgg
ctgtaccctcagccccccgagccgctgccgtccggttcgtcgtcccacgatgccgctgct
cgcaagagcgccaccatcggcaagtacccccagttcgcccagatcgagaagtccctgctg
tcatccatccgcgctctcatggacgacacaaccccctccgacctcgataccaccacgacc
cagatctccggggccttgactctcgccctcgctcacattaacaagactgccctctccctg
accgcctccaacaccgctgctgcggctgtcgcaacggggcattctctcacagctggcagt
gcagccagcgtagccgccaaagcagccagcacctcgaccagcgccggcctggccggccta
cacgcgcgcatcctcatcatttcagtcagcgacagctccgcagcgcagtacatccccacg
atgaacgccgtcttcgccgcagctcacgcccgcatcgccattgacacgctcgcactccgc
ggaagcgctacgtttctcgagcaggcaagtttcatcacgcgcggcaccttcatccgcgcc
gctgagcctcgtggcttgctgcagtacctcatgttcggctttggcagcggtagtgcgcca
tcgaaccctgctgcagcggccgctgccgcggagaagtcgacaattgggggtcccaagcca
tcaggtgccgctgctgcccagcctgctgctggcacaacgaagcctggtgcagctggcaag
ctaccccccggggcggcagtcacggatctgttgatgactcccagcgccgaggcagtcgac
ttccgggcagcctgcttctgtcaccggaatgtggttgatacagggtttgtgtgttctgtg
tgtctcagcattttttgtgaggtgcctccggggggcgaatgcatgacatgcgggacgaaa
ctggcgttgggggattacggaaagatgccggctgctgcagtggaggctgttgctaagctg
attcaagctaaggctggggcagaaaacggggcgacgtcgccttcggcgaggaaggagaaa
cggaaggctgggactaatggggagatctag
DBGET
integrated database retrieval system
