KEGG   Thermochaetoides thermophila: CTHT_0004660
Entry
CTHT_0004660      CDS       T03100                                 
Name
(RefSeq) WD40 repeat-containing protein
  KO
K15361  WD repeat-containing protein 48
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    CTHT_0004660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cthr03400]
    CTHT_0004660
DNA repair and recombination proteins [BR:cthr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     CTHT_0004660
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_Gbeta EIF3I Beta-prop_EML_2 WDR55 Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR41 WD40_RFWD3 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_NOL10_N WDR90_beta-prop_4th Beta-prop_Nup120_160 ANAPC4_WD40
Other DBs
NCBI-GeneID: 18254504
NCBI-ProteinID: XP_006691006
UniProt: G0RXX8
LinkDB
Position
Unknown
AA seq 948 aa
MAKKARQRISYVLEHPNSSPGGHRLGVNGLAIDRENAILYSGGRDGVICAWDLKRSLQNT
HAAVTDPSSHPNPKSIASFRTQTHAHTHWINDITLVQHHNALVSASSDLQVKLWRPLASD
AQEPVPIGHHRDYAKCVATPNQSTNWVASGGLDRRIYLWDLSGKGQVLEIDVSGEEVVEK
GSVYALGVTHSVLANGGPESIVRLWDPKSGKRITKFVGHTDMIRAILVSEEGDMVLSASA
DQTVKVWSVTAGRCMHTLTMHDHSVWALFSDDPGLNVFYSSDRSGLVVKTDVRDTMGDLD
KGLCLAVAKEHEGVSKIVAWDGSIWTATARASINRWQDVDLTGELRLPEAYKQHRASMMS
VRSKESTGPTAGAEGARTTIPAKSVLRISNTASFPLVIDRNADDPFQGQARKTDPSEVEV
EPIYHSPVETIEGQFGLVKHKLLNDRRRVLTLDTAGDVLMWDLIQCRPIRSFGKRHLEDV
EPEVNTKEAVAPWCSIDISSGNLTVVLEPYNCFDAEMYADELTLDEPIEFREDQRINLGK
WVLRYLFANLIDEEIRRDEEFRQSLTKSPPTKKSRGGREAPPLSIDIPPLPKFDPTTQRA
NNNGSHPPVTPGLVIGLATPGSPMIQMGEGTFSPLEKMPSHLAGRPSVEQEDYFSDTIGT
PEPPLTTRLTQGQIPGQEPPSTEESSAKNSTEVAKEKEKDKDKENGTKGSTTFNMKKFRM
NMSFGTKKLSRSTSTAAAEKPALGTTAAAGGVDDKADESETSSTHEKEFDDSFLGVIQRL
RSEYEKLISDHPDKPLDSKITPAPPNDTPPLNIPPGTKVIIQEETTGGSAEVYRGTVASV
GADADIIEEKAPLWLGEALLLNVLPAKEPVKVSFVLYPWKDSLPPIASADGNNRLNANRM
LRVKKILAYVAERIDPAYENEGDVEGEQQGGEGGGKEAEAGGLVGVVL
NT seq 2847 nt   +upstreamnt  +downstreamnt
atggccaagaaggctcgccaaaggataagctatgttcttgaacatcccaactcctcgcct
ggcggccatcgcttgggtgtcaatggccttgccatcgaccgcgaaaatgctatcctctac
tccggcggccgcgatggcgttatctgcgcctgggacctaaagcgttcccttcagaacact
cacgcagccgtcacagacccctcctctcatcccaaccccaaatccatcgccagcttccgc
acccaaacccatgctcacacccactggatcaacgacatcaccctcgtccagcaccataac
gcccttgtctccgcctcctccgacctccaagtcaagctctggcgtcccttagcctccgac
gcccaagagcccgtcccgatcggccaccaccgcgactacgccaaatgcgtcgccacccct
aaccagtcaaccaactgggtcgcctcaggcggcctggaccgccgcatctacctctgggat
ctctctggtaaggggcaggtcctggagatcgacgtcagcggggaagaagttgtggaaaaa
gggagcgtctacgccctgggcgtgacgcattccgttctggcgaacggcgggccggagagt
attgttcgcctgtgggaccccaagtctgggaagaggattaccaagttcgtggggcacact
gacatgattcgggcgattctggtcagcgaggaaggagatatggtgctgtcggctagtgcc
gaccagacggtgaaagtgtggagcgtcacggcggggaggtgcatgcatacgctcactatg
catgaccatagcgtgtgggcgctgttttcggatgatccagggttgaatgtgttttatagt
agtgatcggtctggcttggtggtaaagacggatgtgagggataccatgggagatctggat
aagggtttgtgtctggccgtggcgaaggagcatgaaggggtgagcaagattgttgcctgg
gatgggagtatttggactgcgacggccagggcgtcgattaatcgctggcaggatgtcgat
ctgactggtgagttaaggctgcccgaggcgtataagcagcatcgagcgtccatgatgagc
gtcaggagtaaggagagtactgggccgacggcaggtgccgagggggcgaggacgacgatc
ccagcgaagtctgtcctgcgcatctcgaacacggcgtccttccccttggtcattgatcgc
aatgcggacgatccgttccagggtcaggcacggaagacggacccgtctgaagtcgaagtc
gaaccgatctatcattctcctgttgagacgattgaagggcagtttggcttggtcaagcac
aagctgttaaatgatcggagaagagtcttgactttggacacagctggagatgttttgatg
tgggatctcatccagtgccgtccgatccgaagctttggtaaacgtcatctcgaggatgtc
gagcccgaggtcaacactaaagaagctgtggcgccgtggtgttccattgacatcagttct
ggcaacctgaccgtcgtgttggagccgtacaattgcttcgacgccgaaatgtacgctgac
gagctgaccctggacgagccaattgagtttagggaagaccagagaatcaacctcggaaaa
tgggtcctccgctacctcttcgcgaacctcattgacgaagagatccgtcgcgatgaggaa
ttccgccagagcctcaccaagtcgccaccgacgaagaagtccagaggaggaagagaagca
ccccctctgtccattgacatcccgccactgcctaagtttgacccgaccacacagcgagct
aataacaatggctctcacccccccgtgacgccagggctcgtgatcggattagcgacgcca
ggatccccgatgatccaaatgggtgagggcacattcagtcccctggaaaagatgccttcc
catctggcgggtcgtccatcggttgaacaggaagactacttctcagataccatagggacg
ccagaaccgcctcttacaactagattaacccagggacagatcccaggtcaggaaccaccg
tcgacagaggagtcatcagctaagaactccaccgaggtcgccaaggagaaagagaaagac
aaggacaaagagaatggcactaaaggaagcacaaccttcaacatgaagaaattccgcatg
aacatgtccttcggcacgaagaagctcagccggtccacctcaaccgccgcagccgagaag
cctgccctcggcacgaccgctgcagccggcggcgtcgacgacaaagccgacgaatccgaa
acctcctcaacccacgaaaaagaattcgacgactccttcctcggagtcatccagcgcctg
cgcagcgaatacgaaaaactgatctccgaccatcccgacaaacccctcgactccaagatc
acgcccgccccgcccaacgacacacccccgctcaacatccccccggggacgaaagtcatc
atccaagaagaaacgaccggcggctcggccgaggtctacaggggtactgtggcgtcggtc
ggcgccgacgccgacataatcgaggagaaggcgccgctgtggctgggcgaggcactcctg
ctgaacgtgctgccagcgaaagagccggtgaaggtgtcgtttgtgctgtacccgtggaag
gatagtttgccgccgattgcctcggcggatggaaataatagactgaatgcgaatcgcatg
ctgagggtcaaaaagattttggcgtatgttgccgagaggattgatccggcgtatgagaac
gagggagatgtggaaggggagcaacaggggggagaaggagggggaaaagaagctgaagcc
ggaggattggttggagttgtattgtaa

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