Thermochaetoides thermophila: CTHT_0005760
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Entry
CTHT_0005760 CDS
T03100
Name
(RefSeq) small nuclear ribonucleoprotein F-like protein
KO
K11098
small nuclear ribonucleoprotein F
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CTHT_0005760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0005760
03041 Spliceosome [BR:
cthr03041
]
CTHT_0005760
03032 DNA replication proteins [BR:
cthr03032
]
CTHT_0005760
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
CTHT_0005760
Spliceosome [BR:
cthr03041
]
Complex A
U1 snRNP components
Sm proteins
CTHT_0005760
U2 snRNP components
CTHT_0005760
Complex B
U1 snRNP components
CTHT_0005760
U4/U6.U5 tri-snRNP components
CTHT_0005760
Complex C
U2 snRNP components
CTHT_0005760
DNA replication proteins [BR:
cthr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
CTHT_0005760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
18254614
NCBI-ProteinID:
XP_006691110
UniProt:
G0RY82
Structure
PDB
PDBj
LinkDB
All DBs
Position
Unknown
AA seq
94 aa
AA seq
DB search
MNTGFVPVNPRPFLQDLVNQDVIVRLKWGQTEYKGRLVSIDSYMNIQLANTEEFINYKST
GHLGQVLIRCNNVLWVTAAAGKQMTPTEDTKMEE
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaatactggcttcgtccccgtcaacccgcggcccttccttcaggacctggtcaatcag
gacgtgattgtgcggctcaagtggggtcagacggagtataagggcaggctggtgagcatc
gatagctacatgaacatccagctcgccaatacggaagagttcatcaactacaagtctacg
gggcatctgggtcaggtgttgatcaggtgcaacaacgtcttgtgggtgacagccgccgcg
ggcaagcagatgacaccgactgaggacacaaaaatggaggagtaa
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integrated database retrieval system
