Thermochaetoides thermophila: CTHT_0006960
Help
Entry
CTHT_0006960 CDS
T03100
Name
(RefSeq) RNA splicing factor (pad-1)-like protein
KO
K13091
RNA-binding protein 23/39
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cthr03041
]
CTHT_0006960
Spliceosome [BR:
cthr03041
]
Common components
Common spliceosomal components
General mRNP proteins
CTHT_0006960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PHM7_cyt
RRM_7
RRM_3
Motif
Other DBs
NCBI-GeneID:
18254734
NCBI-ProteinID:
XP_006691227
UniProt:
G0RYJ9
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MSGLDVEALLDSTASSKEQNSKATANGDSPQNGSRSEHTDRERGRDDRSRDDTRGRSRDR
SYSRSRDRDRDRDRSRSPSRDTRDRDRDRRRRDRSPARYRGSSSGRDTPRSEAGSHKSRR
RSRSRESGRHSRRHRDGDYYRGSTRGAGRSRSRSPTRYYRPDRDRDRDARDRGDRYRRRD
DDRDHDRDRDRDRERDRERDRERDRDRRDRARRRSTPREPSPTNDERDRRTVFVQQLAAR
LRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKSEESVAAALQLTGQKLLGIPI
IVQPTEAEKNRQARTTSGHHPNSVPFHRLYVGNIHFSITETDLQHVFEPFGELEFVQLQK
DENGRSRGYGFVQFRDAANAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANLLRGFPG
QGSAFSGAGGRGPPASTFDRAGGRDSDKVSGASALDDTDVAGVNFNNYSRDALMRKLART
DEPAPERQILKPKTVETKPLPVNVNMASRQQGEDWIKELEDEVRQEAEEKYGHVVHIAVD
PNSNGDIYLKFDKVQGGENAIKGLNGRYFDGRMITAAPVVDAVYSSLFSRAKAL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcttagacgtggaggccctcctcgattcgactgcctcctccaaggagcagaac
agcaaggccaccgctaatggcgactcgccgcagaacggaagccgcagcgagcataccgac
cgcgaacgtggtcgggacgaccgtagccgcgacgacaccagaggccggagccgcgaccgt
tcctactcccgctcgcgcgaccgggaccgcgatcgtgaccgcagccgcagcccatcccgc
gataccagagaccgtgaccgcgaccgtcgccgccgtgaccgcagccccgcccgctaccgc
ggctcgtctagcggacgggacacacccaggagcgaagccggaagtcacaagagtaggcgc
aggagccggagccgtgaatctggccgacactcacgtcgtcatagagacggagactactat
cgtggcagcacccgaggagctggccgctcccgctctcgctcgcccacccgctattaccgc
ccggaccgtgaccgcgaccgcgatgctagggaccgcggtgaccgctaccggcgccgcgac
gacgatcgtgaccatgaccgtgatcgggaccgcgaccgcgaacgtgaccgcgaacgtgac
cgcgaacgtgaccgtgaccgccgcgaccgcgcccgccggcgcagcaccccgcgcgagcct
tcgcccaccaacgacgagcgcgatcgtcgcaccgtgtttgtccagcagctggccgctcgc
ctccgtactcgcgagctgaaggagttttttgagaaggctggtcctgttgctgaggcccag
atcgtcaaggatcgtgtcagcaaccgttctaaaggcgtcggctatgtcgagttcaagagt
gaagagtccgttgctgccgcccttcagctcactggtcagaaactcctaggtattcccatc
atcgtgcaacccaccgaggccgagaagaaccgccaggcccgcaccacgtccggtcaccat
ccaaactccgttcccttccatcgtctctacgtgggcaacatccacttcagcatcaccgag
acagatctccagcatgtgtttgagccttttggtgagcttgagtttgtccaactgcagaag
gatgagaacggccgcagccgcggctacggttttgtccagtttcgcgatgctgcgaacgcc
cgtgaggctctcgagaagatgaacggattcgacctcgccggtcggccgattcgcgtggga
cttggcaatgataagtttacccccgagtcaactgccaatctcttacggggcttcccaggc
cagggttccgctttctccggcgccggcggccgtggcccaccggcctcaacctttgaccgc
gccggcggccgcgacagcgacaaggtgtcgggcgccagcgcgctcgacgacacagacgtc
gccggcgtcaactttaacaattacagccgtgacgccctcatgcgcaagctggccaggact
gacgagccagcgcccgagcgacagattctcaagcccaagaccgtggagactaagccgctt
cctgttaatgttaacatggccagtcggcaacaaggcgaagactggatcaaggagctcgag
gacgaggtgcgccaggaggccgaggagaagtatggccacgtcgtgcacattgccgtcgac
cctaactccaacggcgacatctacctcaagtttgacaaggtgcagggcggcgagaacgcc
atcaaaggcctcaacggccgctatttcgacggccgcatgattacggccgcgcccgtcgtc
gacgccgtctacagcagtttgttctctcgcgccaaggctctctaa
DBGET
integrated database retrieval system
