Thermochaetoides thermophila: CTHT_0007290
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Entry
CTHT_0007290 CDS
T03100
Name
(RefSeq) nuclease-like protein
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthr03400
]
CTHT_0007290
DNA repair and recombination proteins [BR:
cthr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
CTHT_0007290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GEN1_C
XPG_I
XPG_N
Motif
Other DBs
NCBI-GeneID:
18254767
NCBI-ProteinID:
XP_006691260
UniProt:
G0RYN2
Structure
PDB
PDBj
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MGIKGIYKEIGSGERISLCKLAIDHLEQHNRPLRLAIDMAIWQFQIQAARGGSNPAIRTL
FYRFVRLLSLGIHPIFVFDGPNKPIFKRNRRSGTGNGVSTAMAKRLIRLFGFTAHDAPGE
AEAECAYLEQQGIVDAVLSEDVDTIMFGSRVTLRDWSSEGSKGGPPTHVTLHDAKKIAEG
PSGLDREGMVLVALMSGGDYLPDGIPGCGIKVACQAAKAGFGKELCRIKRADKEAITEWK
QRLLHELRTNESGFFRTKHKALEIPENFPNMEVLRYYTHPVVSSPATIERLRQEFPPSST
VDIAGLREFTRETFDWTFRPGAIKLIKVLAPGLLVQRCLDRYVSGPRIDDPDLKKKEEST
LVKGISMRREHFSTDATPELRVSFIPAELVGLDPGQEPEVQVEAFGRSGLALNSDDEFDE
DISSSQKAPKKPFDPWQPDLAWVPETILKLGVPVTVEDWEEGQRSKGRAKEDKTAAKAKR
KTKIIQSNMPAGALDKYVTVTKNISDTTVKSKESAPITIPSSPPKPSSQPAPPTLTRSKQ
AKKPSTKLSKQPTTRPSLDINPWTIASSQCSPPRAGPSSTLTADLLSTPTNDPPRSPAVS
HVAKTMPGGSTTSSDILPSHTAAAARDVEPILIESSPVVPPPGTTASSTMANSSHPRQGT
LVRGGVRGYGQKTPPKRQKRRVGQRALEEAEDSPALPTDEAKPSEVHAESQLVRKDRTFK
RVKSGTEDDLSSNTASTTTQAVKQTTAPSSTSTQTSIKSFGRVSKEPIKISSEKVAAIET
IVLSDSDSDSDDDDDLPLLFPTKKAPPFLRSEQNPSSSSTGSRSASSSTFVPASKSSTLV
PDDDNHDEADPFGPIRPPSGDNGTQPIRSASEIPQEPGDDDTKAEKKVLGRGVWGWNARE
WGKERRMWRVSEIEVVDLTGED
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcaaagggatctacaaagaaattggcagcggcgagcgcatctcgctttgcaaa
ctggccatcgaccatctcgagcaacacaaccgacccctccgtctggccattgacatggcc
atatggcaattccaaatccaagcagcgagaggtggctctaaccccgcaatccgcaccctc
ttctaccgcttcgtgcgccttctcagcctaggcatccaccccatcttcgtcttcgacggc
cccaacaagccgatcttcaagcgcaacaggcgctccggcaccggaaacggcgtatcaacc
gccatggctaagcggctgatccggctcttcggcttcaccgctcacgacgcccccggcgag
gcagaagccgagtgtgcctacctcgagcagcagggtatcgtggatgcggtcctcagcgag
gacgtcgataccatcatgttcggatcgcgggtgacgttgagggattggtcctctgagggg
tcgaaaggaggacccccgacacatgtcacgctgcatgatgcgaagaagattgcggaggga
ccgagcgggcttgatagggaggggatggtgcttgttgcgctgatgagtggtggtgattac
ttgccagatgggatccccgggtgtgggatcaaggttgcttgccaggcagccaaggcaggg
ttcggcaaggagctttgccggattaagcgggccgataaagaggcgattactgaatggaag
cagcggttgctgcatgaattaaggacgaatgagagtgggttttttaggacgaagcacaag
gcgttggaaataccagagaattttcctaatatggaggttctgaggtattacacgcatcct
gtggtgtcgagcccggcgacgatcgagagactgaggcaggagtttcccccctcctcaact
gtcgacattgctggattaagggaattcactcgggaaacatttgactggaccttccggccg
ggcgcgatcaaactgatcaaagtccttgcccccggcttgctggtccagcgctgtctcgat
cggtacgtctctggaccgcgaatcgacgatcctgaccttaagaagaaggaggagtcgacg
ttggtcaaggggatttctatgagacgggagcattttagcaccgacgccacgcccgagctg
cgcgtctcgttcatacccgccgaactcgtcggcctcgacccgggtcaggagcccgaggtg
caggttgaggcgttcggccggagtgggctcgcgctgaatagtgatgacgagtttgatgaa
gatatctcgtcgagtcaaaaagccccgaaaaagccctttgatccatggcaacctgattta
gcttgggttcctgaaacgatcctcaagctcggcgtgcctgtcactgtggaggattgggaa
gagggacaacgaagtaaaggacgagccaaggaagacaaaactgcagccaaagcgaagcgc
aagaccaagataattcagtccaacatgcctgccggagcattggacaagtatgtcacggtt
acgaagaacatcagcgacaccaccgttaaatccaaagaatctgcccccatcaccatcccc
agctcacctccgaaacccagcagccaacccgcgccgccaacactcacaagaagtaagcag
gccaagaagcccagcacaaaattgtccaagcaacccaccacccggccgtccctcgatatc
aatccgtggacaatagcaagctcacagtgcagtccacctagggccggcccttcttccact
ctcactgccgatctcctttctactccaaccaacgaccctccgcgttctccagctgtatca
cacgtggctaaaacaatgcctggaggttcgactacttccagtgacattcttccaagccat
accgccgccgccgctcgcgatgttgaacccattcttatcgaatccagtcccgtcgttcct
ccccccggtacgactgcgtcatctacgatggctaactcttctcacccgcgtcagggtacg
cttgtccgcggcggtgtgaggggttatgggcagaagacgccgccgaagaggcagaaacgg
agggttgggcagagggcgttggaggaggcggaggattcgcctgctttgccgacggatgag
gccaaaccgagtgaagttcatgctgagtctcagctggttaggaaggataggacgttcaag
agggttaagagcggtaccgaggacgacttgagttcgaatactgcaagtacgacgactcag
gccgttaaacagacaactgccccctcatcaacgtcaacccagacgtcgatcaaatccttt
gggagggtatccaaagagccgatcaaaatatcctcagaaaaagtggcggccatcgagaca
atcgtcctttcagattccgactcagactctgatgatgacgatgacttaccccttctcttc
cccaccaagaaagctccacccttccttcgcagcgagcaaaacccatcctcgtcttcaact
ggatctcgctccgcgtcgtcatctacctttgtcccagcctctaagtcgtcaaccttagta
ccagacgacgacaaccacgacgaagccgaccccttcggccctattcgtcccccttccgga
gacaatgggacccagcccatcagaagcgcatccgaaattccccaagagcctggtgatgat
gatactaaggcagagaagaaggtgcttgggcgaggggtgtggggatggaatgctagggaa
tgggggaaggaaaggaggatgtggagagtgagtgagattgaggttgttgatttgacgggg
gaagattaa
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