Thermochaetoides thermophila: CTHT_0008050
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Entry
CTHT_0008050 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CTHT_0008050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cthr03009
]
CTHT_0008050
03016 Transfer RNA biogenesis [BR:
cthr03016
]
CTHT_0008050
03029 Mitochondrial biogenesis [BR:
cthr03029
]
CTHT_0008050
Enzymes [BR:
cthr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
CTHT_0008050
Ribosome biogenesis [BR:
cthr03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
CTHT_0008050
Transfer RNA biogenesis [BR:
cthr03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
CTHT_0008050
Mitochondrial biogenesis [BR:
cthr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
CTHT_0008050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POP1_N
POPLD
POP1_C
GCV_T_C
Motif
Other DBs
NCBI-GeneID:
18254843
NCBI-ProteinID:
XP_006691335
UniProt:
G0RZY3
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDFKQPRPSGNGQDGGKKRKEPPTAAKDNRSQSRGTPTNAPSSSRAAKRVKWQDARNIRT
LPADDALDDGKLDLQKFIEARTFEIQALESSMAKCKAASATRVFQQVPRSMRRRTASHNA
KRVPKRLRERAKKEMLEDNTPTVEARKRRPRTTRARIRAETAKRLSILAAKKKKKLLQKK
KQLEEQRAEKGDAQGPSASGASSQIDSKPKAHTRQPRPKIRRNMLNDPPKADSKFRKRQI
NKTWLPTHLWHAKRAKMTEPKKPLWRFAIPLTPTEKCYRPTHRALGQKGAVAWDMSYMST
ISLSGTANGVERVLKELGLTQETLWGIRGQKWRAGLRTWTGILSRQTKGSRRDIGPATII
WNPEDRIPADDQSSRPKKSRRQLLIRTHPSCFLELFEELVKLAKAQSPQLHVEDLRFEIG
SIELIGPGSTEALLGVLKPYHDKTGSEERHAQVFKSLAGLTNPAALPKGALLSFSARDPR
LSYPPKTIDVPLGGVDAILVELLAQWPADQDPKSIGLFDRDSRFEASRLPSQKAINRRKG
ANAPGEPLPVTDADPPIPIVLYASRPATDGQAQGTWTLMAPWKCIMPIWYALMHYPLSTG
GNPRFGGLREQMQMAFEQGVPWFPADFPATDAGLSWELEQRAKRKQEWERRPKGKRVEWK
SLDLGAGRKGEIGNGHACDFEHLFALNAAPTSSSSSSEETNTSSASGPIEKMDLDPPERA
EGAETAACSKASTILPLGLVRQMTKASFTTLSKSPNPDKPPAYSIITVSITFVTRGVAST
CARIYRLPTRKTPTAQCADVEVTATPANSPGSLPFDLRDQWLRKLPASNSPSFGNSKTGK
GKSPSRLVGPLLPPAKQMPAGVDFETRKKLLAQSLIVGPDNPPLPYPKPGGPLNDPSHQN
QHHPLCPGEEDLIGFVTTGAFSLSEGKGTAIGSISAEKALEALRDGGPAEGRLCVVRNAG
ESVGWLAKWELV
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacttcaaacaacctcgcccctcaggaaacgggcaggatggaggaaagaaacgcaag
gagcctccgaccgccgcaaaagataaccgctcccagtcaaggggaacacccactaatgcc
ccctccagcagtcgcgcggcgaagcgcgtcaagtggcaggatgcccgcaatatccgcacc
ctacccgccgacgacgccctcgatgatggaaaactggatttgcagaagtttatcgaagcg
cgtaccttcgagatccaagcgctcgagagcagcatggccaagtgcaaggccgccagcgcg
acccgtgtcttccagcaagtgccccgttccatgcgtcgccggacggccagccacaatgcg
aagcgtgtgcccaagcgattgcgtgagcgcgcgaaaaaagagatgctagaggacaacaca
ccgaccgttgaagcccggaaacggcgccctcgcaccacccgtgcccgaatccgtgccgaa
actgcaaagcgcctaagcatcttagcggcgaagaaaaagaagaagctgctgcagaagaag
aagcagctggaggagcagcgagctgagaagggcgatgctcaaggaccctctgcttcaggg
gcatcgagtcagatcgatagcaaaccgaaagcgcacacccgccagcccaggccgaagatt
cgtcgcaacatgctgaatgatcctccaaaagccgattcaaagttcagaaaaagacagata
aacaagacgtggctgccaacacatctgtggcatgcaaaaagggcaaagatgactgagccg
aagaaaccgctttggaggttcgccatccccttgaccccaacagagaagtgttaccgcccg
acacatcgtgctcttggccagaagggcgctgtggcatgggacatgagttacatgagcaca
attagcctatctggcactgctaacggtgtcgagagggtcctgaaagagcttggtctgaca
caagagacactgtgggggatccgtggccaaaagtggcgggcaggtctgcggacttggact
ggaatactcagcagacagaccaagggttcgagacgggacatcggaccggccacaatcata
tggaatcccgaggaccgcattccagcagacgatcaatcatctcgacccaagaagtcccgg
agacagctcctgatccggacgcatccgtcttgcttcctcgaactattcgaggagctcgtc
aagcttgccaaggcacaatccccacagcttcatgtcgaggacctgcgctttgagatcggc
agcatcgagctaataggcccgggctctactgaggccctgctcggagtgctgaagccttat
cacgacaaaactggctctgaggagcgccatgcacaggtcttcaagagcctggctggcctt
accaaccccgctgcccttccaaagggggcccttttgtcgttctcagccagagacccccga
ttgtcataccctcccaagacgattgatgtccccctcgggggtgtggatgcgattttggtc
gagctactcgctcagtggccagccgaccaagaccccaaatcaatcgggctctttgaccgt
gacagccggttcgaagcgtcgaggttaccatctcaaaaggccatcaacaggcgaaaagga
gccaacgctcctggagagccgctccctgtgacagatgccgatcccccaatccccattgtc
ttgtacgcttccagaccagcgacagacggacaagcacaagggacatggacgcttatggct
ccatggaaatgcatcatgcccatttggtatgccttgatgcattacccgctctcaaccggg
ggtaatccgagatttggtggtttgcgcgagcagatgcagatggcctttgagcagggagtg
ccgtggtttcctgctgactttccggcaacggacgctgggctctcctgggagctggaacag
cgcgccaagagaaaacaggaatgggagcgtcgtcccaagggcaagagggtggaatggaaa
tcccttgacctaggtgctggacgaaaaggggagatagggaatggacacgcttgtgacttt
gagcatttgtttgcgctcaacgcggctcccacgtcttcttcttccagctcggaagagaca
aacacctcatcggcttcaggaccgatcgagaagatggatcttgatcccccagagagagcg
gaaggggctgagactgccgcctgcagcaaggcttctacgatcctgccactcggactggtt
cgacagatgactaaagcatcattcacaacgctatcaaagtcaccgaacccagacaagcca
ccagcatattcgatcatcacagtgagcataacgttcgtcacgaggggcgtcgcgtcaaca
tgtgcaaggatctaccgcctgccgacgcgtaagacgccgacagcccaatgcgcagacgtc
gaagtaaccgcaacaccggcaaactctcctggctcgctaccattcgacctcagggaccag
tggcttcggaaactgccagcatcaaactccccgagcttcgggaactccaagaccggcaag
ggcaaatcaccttcccgattggttggcccgctactgccaccggcaaagcagatgcccgcc
ggggtcgactttgaaacacgcaaaaagctcctcgcacagtcactcatcgtggggcctgac
aatccccccctgccatatcccaaacctggaggaccgttgaatgacccgagtcaccagaat
cagcaccatccgctgtgcccgggagaggaggacctcatcgggtttgtgacgaccggggcg
tttagcctcagtgagggtaaaggcacagcgattgggtccatctcggctgagaaggcactg
gaggcgttgcgtgatggtggccctgctgagggtaggttatgtgtggtaagaaacgcgggg
gaaagcgtgggctggctggcgaagtgggagcttgtgtag
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integrated database retrieval system
